Gene
| Gene Model ID | pfu_aug1.0_83.1_50624 |
|---|---|
| Locus | scaffold83.1 : 161346 ... 180394 : + |
| To GenomeBrowser | scaffold83.1:161346..180394 |
| Genes list of scaffold | scaffold83.1 |
| Synonym | pfu_aug2.0_5145.1_19400 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_83.1_50624.t1 | 2 | 1 | NACHT | 54 | 105 | 1.1e-11 | 44.6 | 0.63 | 9300.0 | -3.9 |
| pfu_aug1.0_83.1_50624.t1 | 2 | 2 | NACHT | 300 | 474 | 1.1e-11 | 44.6 | 1.3e-14 | 1.9e-10 | 40.6 |
Transcript
| Transcript ID | pfu_aug1.0_83.1_50624.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83.1_50624.t1 atgaggaccaattgtgccccactccttgccgacattttcttttactcgtacgaagctgaattcattcaatctttggtctc tgaagggaaaagatacttagcttctgacttcaacttcacttacagatacttagacgatgtgttgtccatcaacaatccaa atttcgcggattacctgagcaatacaggtctaaagaagcacggaacattgatggaagaacatgcgggacagatagcatcg atagacacagaagttaagacgcaaggagtgataatattaaaccaagcggacctaatcagcaatttagattctcagtacca gttgcagcaggatcagataggagacatcagaaagcaaattgaaaccgaggtgaatgactcagacacagggagaaaactag acgtacagagactcaaggaaaacttaattacgattaataatcgtgaagccgaagtcattcctgccactccgtttcaagaa gatggcgatactctgccaattgagctactctatgcttcagtagtaatcagggaagactttaagtacaccttctgcaggga acattctacaaacaaggcgcaatcaaaatcactacctgacataacgtttgaggacagatacagtgatgactcttcagaaa cagaaggtgtaaatcaggagcgtattgcaacatcagagatacatgtaacaaacacggggataagagagcaattggctctt aacactgagagtagtgagagtacccctaaccaaccaagtcaagacagtatttcaagtaaggaatcctcagaagattatgg ggaagagtcgtatgatcttgttgtcactccaacactaaacaagaaagtcacggacacaagcgaaatatttagtaaaagcg gacaagctgtaagaaatatatacatgttgggagatgcagctcatggcaaaacaacgtattgcttatggatcgtaaagaag tggtgcgatgcgcatacagcagattgttttgaagatgaccacagactgacacaatgggaagaaacaatgcaggcatttga cttcgtgtttctacttcaactacgaggcattaatcctaaaagaactaatgttattgatatgatctgtcaggatttatttg gaagacaaaaagactgccatgccaccatacgtcatgtattgtcatctgtaaaatataggatcctcattataattgatgga ctagatgagtggaacccaaatgaagaggcaagaaaacagcttacatttccaggaatgccgaatatagaaggcgtatcaag tagtgttacttgctttatatccatgcggccatgggtgttttcagtaatgtctaagctgatccgcagcaatgatagagtgc ttgaaataaaaggactcagtgaaaagggaatacgaaaagttattaaaaatgttctttcaaactattacatggtgcagaaa agttcatctgaatataggaattcatttttaaaaatcactggtaaattgaaagacaaaaatcttagatctttcatgaagat acccttgttagctgttgtatgtgtacagatttggtattcagggagagggattgctaacagtctaacaagtttctatgctg tcatgatagatatgttgattgaaagagctagcgaaaaacatgactttcaatctgttccagtctcacaagtggattgcaat ttaccgaccttgtacatcgaagatgaaaccgaaaacttgctccattacatgtctatcatgctaaagttagggaaagtggc atatgagggtttggtctcgtataaaggtagcttggtttttcaaaaaaggaagttgaaaaaagaaattggtgctgatgaaa cacaatttgcgcttgatattggaataataagtcagaaaggaggatcaagcgcaacttcaaaaagcataaaggtcattttc ttccataagtctatacaggaatttcttgcagcgatatacgtcgtatcaaaaggagaggttacagattcattttgtaagta cctgtcaaatgccaagactatcatggaattttctaatgtcatcagattcatttgcggcataagtccgtcctttggaagta ctatatcacaacgtgttgtagatgtgataggcaatgatgcagagatgttggaatacagagaggcagcgttgtcaaattat cccagagacctctacaaacttcaagcaaattggtatagagaacttcagcatggccaggcaatgacagacgaacgtgttcc atttcatatttcagatatatgtgtggtaagaggttgcgatagagacatggcaaatcttacaagggaaacaatatctaacc ctgaaagcaacctaaggtctctaaaactgcatttcgtgaaaacaagtgggaaacgaggaatcagctgtactgttttgaac gaatttcttaaaaaggtagagaacaaattgtcacttacgacgctctatatttgtggaggcaagtttgatcggttcgttca atcaatctgtgggccttctttgcaaacattacatctgattcatctaaaaattatgaatcctcattttgaaggggatgtag atcgttccatatttagagaactaacttctctgcgtagattacatatgaataaactgacgtttgatgagaatggtttggag ttaccaagtttacctgtgttacagcacctagaacttcatgatattatattgggggtgccaggattggttttgccaaactt accctcattgattactcttaaactgaatagtctaacgataaaggagaagcgaatatatttgccaaaatacccctcattaa gaagtttagagatatctgggatgaaaataggtgaaaagggactggtcttaccgacgttaccaacattggaaattttgaca ctttattacattccaacagatgaaggagagtttgagttaccaaatctgccgtcccttcaaagtcttaatttgcatggcat aaaatttcataaccttggtgaagtgttcgacaacatcaaatttctagaaaatttgaaactctacggtgtaactctcggcg acaaaggattgaatttatcaaacttatcatccttacaaaatttagagtttgttaatgtatcgtttgagtttccgggacaa atattttcaagtttaccgctgacattgcgaaaattggagttattgaagatatccttagacgatagacagttatgtagcat cagtggcttggttaaaatatccaacattatattcactgatgtctcgctttcaagatcagcgtggcaggattttattcatt cgcttcaagtaatggaccatgggattaatgttgagctcacagacacaaatttagatcaagatacaaaaactaagatatgt tcatctccacagtttgttgttacacgcaatgactatgacgatgtaaaacacccgaaggattcttttgaacattctctatt attctcatgtcacaaagaggaagttttgataccgttgctttcaaaatctaaacagttagtcgagtttaccatccgaggat ag |
|
Protein
| Protein ID | pfu_aug1.0_83.1_50624.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83.1_50624.t1 MRTNCAPLLADIFFYSYEAEFIQSLVSEGKRYLASDFNFTYRYLDDVLSINNPNFADYLSNTGLKKHGTLMEEHAGQIAS IDTEVKTQGVIILNQADLISNLDSQYQLQQDQIGDIRKQIETEVNDSDTGRKLDVQRLKENLITINNREAEVIPATPFQE DGDTLPIELLYASVVIREDFKYTFCREHSTNKAQSKSLPDITFEDRYSDDSSETEGVNQERIATSEIHVTNTGIREQLAL NTESSESTPNQPSQDSISSKESSEDYGEESYDLVVTPTLNKKVTDTSEIFSKSGQAVRNIYMLGDAAHGKTTYCLWIVKK WCDAHTADCFEDDHRLTQWEETMQAFDFVFLLQLRGINPKRTNVIDMICQDLFGRQKDCHATIRHVLSSVKYRILIIIDG LDEWNPNEEARKQLTFPGMPNIEGVSSSVTCFISMRPWVFSVMSKLIRSNDRVLEIKGLSEKGIRKVIKNVLSNYYMVQK SSSEYRNSFLKITGKLKDKNLRSFMKIPLLAVVCVQIWYSGRGIANSLTSFYAVMIDMLIERASEKHDFQSVPVSQVDCN LPTLYIEDETENLLHYMSIMLKLGKVAYEGLVSYKGSLVFQKRKLKKEIGADETQFALDIGIISQKGGSSATSKSIKVIF FHKSIQEFLAAIYVVSKGEVTDSFCKYLSNAKTIMEFSNVIRFICGISPSFGSTISQRVVDVIGNDAEMLEYREAALSNY PRDLYKLQANWYRELQHGQAMTDERVPFHISDICVVRGCDRDMANLTRETISNPESNLRSLKLHFVKTSGKRGISCTVLN EFLKKVENKLSLTTLYICGGKFDRFVQSICGPSLQTLHLIHLKIMNPHFEGDVDRSIFRELTSLRRLHMNKLTFDENGLE LPSLPVLQHLELHDIILGVPGLVLPNLPSLITLKLNSLTIKEKRIYLPKYPSLRSLEISGMKIGEKGLVLPTLPTLEILT LYYIPTDEGEFELPNLPSLQSLNLHGIKFHNLGEVFDNIKFLENLKLYGVTLGDKGLNLSNLSSLQNLEFVNVSFEFPGQ IFSSLPLTLRKLELLKISLDDRQLCSISGLVKISNIIFTDVSLSRSAWQDFIHSLQVMDHGINVELTDTNLDQDTKTKIC SSPQFVVTRNDYDDVKHPKDSFEHSLLFSCHKEEVLIPLLSKSKQLVEFTIRG |
|