Gene
Gene Model ID | pfu_aug1.0_830.1_15250 |
---|---|
Locus | scaffold830.1 : 41446 ... 46422 : + |
To GenomeBrowser | scaffold830.1:41446..46422 |
Genes list of scaffold | scaffold830.1 |
Synonym | pfu_aug2.0_397.1_23973 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_830.1_15250.t1 | 1 | 1 | Lectin_C | 124 | 227 | 1.6e-16 | 60.8 | 7.1e-20 | 3.5e-16 | 59.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_830.1_15250.t1 | gi|260807733|ref|XP_002598663.1| | hypothetical protein BRAFLDRAFT_67064 [Branchiostoma floridae] | 9.0e-13 |
Transcript
Transcript ID | pfu_aug1.0_830.1_15250.t1 |
---|---|
Definition | - |
>pfu_aug1.0_830.1_15250.t1 atgctgccttttgattctcatgttaagttcatagactgtcaacaacttctgtcaatacccgatgagaagtgttttgaatc accatgggtcacacgctggacgaatgatgtcagagcttacgtcattcaaatatatgaactgttcacagagtatgttgagc tggtgtctgaagatatcaatgcgactcttagtgttagccagcgcctgaaaaaggctatagcagaacttcaaatgatagtt aaagatttaccaaagtctcctgccaagaaagatgaacgaattcaaaaaatgtatacaggacacaaatcatcagaaaattg ccaattgttcatgtttggtgacactgtgtacttcgtatctgatttcagactcacttggttagaagcatggtctttttgta ggagtaaaggtgcacttctagtaaacattccaaattcaacgataagcagatatcttatttcaaaattggatccatacaat ggcgacttttggattgggggcatctgggctcctggaggatatttatggagaacagagttcgggtacagtccgatgacgtg gtcaaactgggctcccggtgagccaaatcgtaaagaccaaaactgtgtccagttgtggaaaaacgcaggtcacaaatggg acaactacgattgcgaatttaggaaaactttcatttgcagcagaactttaccataa |
Protein
Protein ID | pfu_aug1.0_830.1_15250.t1 |
---|---|
Definition | - |
>pfu_aug1.0_830.1_15250.t1 MLPFDSHVKFIDCQQLLSIPDEKCFESPWVTRWTNDVRAYVIQIYELFTEYVELVSEDINATLSVSQRLKKAIAELQMIV KDLPKSPAKKDERIQKMYTGHKSSENCQLFMFGDTVYFVSDFRLTWLEAWSFCRSKGALLVNIPNSTISRYLISKLDPYN GDFWIGGIWAPGGYLWRTEFGYSPMTWSNWAPGEPNRKDQNCVQLWKNAGHKWDNYDCEFRKTFICSRTLP |