Gene
| Gene Model ID | pfu_aug1.0_830.1_15250 |
|---|---|
| Locus | scaffold830.1 : 41446 ... 46422 : + |
| To GenomeBrowser | scaffold830.1:41446..46422 |
| Genes list of scaffold | scaffold830.1 |
| Synonym | pfu_aug2.0_397.1_23973 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_830.1_15250.t1 | 1 | 1 | Lectin_C | 124 | 227 | 1.6e-16 | 60.8 | 7.1e-20 | 3.5e-16 | 59.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_830.1_15250.t1 | gi|260807733|ref|XP_002598663.1| | hypothetical protein BRAFLDRAFT_67064 [Branchiostoma floridae] | 9.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_830.1_15250.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_830.1_15250.t1 atgctgccttttgattctcatgttaagttcatagactgtcaacaacttctgtcaatacccgatgagaagtgttttgaatc accatgggtcacacgctggacgaatgatgtcagagcttacgtcattcaaatatatgaactgttcacagagtatgttgagc tggtgtctgaagatatcaatgcgactcttagtgttagccagcgcctgaaaaaggctatagcagaacttcaaatgatagtt aaagatttaccaaagtctcctgccaagaaagatgaacgaattcaaaaaatgtatacaggacacaaatcatcagaaaattg ccaattgttcatgtttggtgacactgtgtacttcgtatctgatttcagactcacttggttagaagcatggtctttttgta ggagtaaaggtgcacttctagtaaacattccaaattcaacgataagcagatatcttatttcaaaattggatccatacaat ggcgacttttggattgggggcatctgggctcctggaggatatttatggagaacagagttcgggtacagtccgatgacgtg gtcaaactgggctcccggtgagccaaatcgtaaagaccaaaactgtgtccagttgtggaaaaacgcaggtcacaaatggg acaactacgattgcgaatttaggaaaactttcatttgcagcagaactttaccataa |
|
Protein
| Protein ID | pfu_aug1.0_830.1_15250.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_830.1_15250.t1 MLPFDSHVKFIDCQQLLSIPDEKCFESPWVTRWTNDVRAYVIQIYELFTEYVELVSEDINATLSVSQRLKKAIAELQMIV KDLPKSPAKKDERIQKMYTGHKSSENCQLFMFGDTVYFVSDFRLTWLEAWSFCRSKGALLVNIPNSTISRYLISKLDPYN GDFWIGGIWAPGGYLWRTEFGYSPMTWSNWAPGEPNRKDQNCVQLWKNAGHKWDNYDCEFRKTFICSRTLP |
|