Gene
| Gene Model ID | pfu_aug1.0_832.1_29450 |
|---|---|
| Locus | scaffold832.1 : 58946 ... 76463 : + |
| To GenomeBrowser | scaffold832.1:58946..76463 |
| Genes list of scaffold | scaffold832.1 |
| Synonym | pfu_aug2.0_694.1_14468 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_832.1_29450.t1 | 2 | 1 | EF-hand_7 | 173 | 226 | 7.1e-07 | 29.2 | 0.00079 | 2.9 | 8.0 |
| pfu_aug1.0_832.1_29450.t1 | 3 | 1 | EF-hand_6 | 174 | 195 | 8.4e-06 | 25.2 | 0.037 | 140.0 | 2.7 |
| pfu_aug1.0_832.1_29450.t1 | 3 | 2 | EF-hand_6 | 207 | 224 | 8.4e-06 | 25.2 | 0.017 | 62.0 | 3.8 |
| pfu_aug1.0_832.1_29450.t1 | 3 | 3 | EF-hand_6 | 243 | 268 | 8.4e-06 | 25.2 | 6.3e-06 | 0.023 | 14.5 |
| pfu_aug1.0_832.1_29450.t1 | 2 | 2 | EF-hand_7 | 244 | 312 | 7.1e-07 | 29.2 | 4.2e-07 | 0.0016 | 18.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_832.1_29450.t1 | gi|260788520|ref|XP_002589297.1| | hypothetical protein BRAFLDRAFT_97380 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_832.1_29450.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_832.1_29450.t1 atgaatcctacagaccgtcaaataggactcttaagggttcggacaactgctacgaccacagagaacttactctcaaagcg tgtcagatttggtgctcgtatactcactagagatgttgaaattaaccggtccgactggcaaaaccggttaaaatttgaaa tgaccggaagagggaaatactgtcatatacagggaccaaagaaaggggaaccttactccctcgtggatatacactcgggt gcagacgttttgatttccactgcgggacaacactcgttacctgatactgccagaaaaagtcccgtcattagattcagagt cacagacttggacgaagaagcaaaacaagcattcctgttacaagatgtgagaccatcggcccgtggtgatatgtacgccc atttacacatgcagaataaacaggagcacagaaacaaactcactatcgcaagtgttcaagctgaagtacagaaaaaactg acgaagcgaggaataaagacatacacaggactcggcagatattacaggaagttagacgacactaacactgggatactgta tagatttgagttagagaaaggtctctttacttacagaatagaactccctccagagcttttagatgctgtgtttgaagcat tagatacagaggaggaaggggaactagactacagtgtctatatgagaggtgttataggagaaatgaatgaatacaggaaa accctggtcagaaaggcttttaggaagatagattcacagaagagaggcaaagttaccataagtgatatcaaaaagtattt taatgctagcttccgacctccacccaacgcaggtacaacacaagacagtaataatccactgacggctttcttagactcgg taacaacttctccctcccaggatacagtgtcgtacgtggagttcgaggaatattacgagggacttagtttgtgtatagag agagatgaggactatgctaatatactacataacacgtggaatatctga |
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Protein
| Protein ID | pfu_aug1.0_832.1_29450.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_832.1_29450.t1 MNPTDRQIGLLRVRTTATTTENLLSKRVRFGARILTRDVEINRSDWQNRLKFEMTGRGKYCHIQGPKKGEPYSLVDIHSG ADVLISTAGQHSLPDTARKSPVIRFRVTDLDEEAKQAFLLQDVRPSARGDMYAHLHMQNKQEHRNKLTIASVQAEVQKKL TKRGIKTYTGLGRYYRKLDDTNTGILYRFELEKGLFTYRIELPPELLDAVFEALDTEEEGELDYSVYMRGVIGEMNEYRK TLVRKAFRKIDSQKRGKVTISDIKKYFNASFRPPPNAGTTQDSNNPLTAFLDSVTTSPSQDTVSYVEFEEYYEGLSLCIE RDEDYANILHNTWNI |
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