Gene
Gene Model ID | pfu_aug1.0_83243.1_63898 |
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Locus | scaffold83243.1 : 1 ... 2295 : + |
To GenomeBrowser | scaffold83243.1:1..2295 |
Genes list of scaffold | scaffold83243.1 |
Synonym | NA |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to FR715662 (MgC1q83). 97 bits, 1e-18 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_83243.1_63898.t1 | 1 | 1 | C1q | 10 | 132 | 2.3e-22 | 79.3 | 3.4e-26 | 2.6e-22 | 79.1 |
Transcript
Transcript ID | pfu_aug1.0_83243.1_63898.t1 |
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Definition | - |
>pfu_aug1.0_83243.1_63898.t1 atatttcaatcaacgattcacagcaaattgcatttacagcgtgccgaacaactggagttcaacttagcaacggtcaaact gtagcctacgaccatgtggttaccaatcttggaggtggttatgacactaatcagtttcaattctctgcaccgttatcagg gctgtatcaattcacggtgacggttatgtctgggatgaataccataatacatcttcgtatcgtcaagaacggatcagagc tggtaaaggttttcagtacaggacattgggacgaaacgggaacaaatgtcgtaaacgtgcacctacataaaaatgacagg gtgtgggttcaggcaatggatacgagtagcgcattggaaggtggttttgggtataactgtttctctggaattctcattca agcagatgtataa |
Protein
Protein ID | pfu_aug1.0_83243.1_63898.t1 |
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Definition | - |
>pfu_aug1.0_83243.1_63898.t1 ISINDSQQIAFTACRTTGVQLSNGQTVAYDHVVTNLGGGYDTNQFQFSAPLSGLYQFTVTVMSGMNTIIHLRIVKNGSEL VKVFSTGHWDETGTNVVNVHLHKNDRVWVQAMDTSSALEGGFGYNCFSGILIQADV |