Gene
| Gene Model ID | pfu_aug1.0_8329.1_38732 |
|---|---|
| Locus | scaffold8329.1 : 37846 ... 43290 : + |
| To GenomeBrowser | scaffold8329.1:37846..43290 |
| Genes list of scaffold | scaffold8329.1 |
| Synonym | pfu_aug2.0_32.1_06778 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8329.1_38732.t1 | 1 | 1 | Fringe | 30 | 201 | 2.9e-12 | 46.3 | 2.5e-15 | 1.9e-11 | 43.7 |
| pfu_aug1.0_8329.1_38732.t1 | 2 | 1 | Galactosyl_T | 77 | 142 | 3.4e-06 | 26.7 | 3.4e-08 | 0.00025 | 20.6 |
| pfu_aug1.0_8329.1_38732.t1 | 2 | 2 | Galactosyl_T | 153 | 201 | 3.4e-06 | 26.7 | 0.0048 | 35.0 | 3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8329.1_38732.t1 | gi|322784921|gb|EFZ11692.1| | hypothetical protein SINV_02117, partial [Solenopsis invicta] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_8329.1_38732.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8329.1_38732.t1 atgcgtgtacgtcgccggctcgtgtacagggtgactttagcggcggcattcctaagttttgtttattgtacaaagaagaa tgcaaaatacagtagaatcctatgttttgttatgacgacaccctcaaacattgccactaaggctatggcggtgaataaca cgtggggatcaagatgtgataaattactatttgtgaatgcggaagtcataacgtcactgcctactatggtcatagaagtg gaggaaggtagagaccacttaacaaagaaaacatacaaatctcttcagtatctttacaaacactacgtcgatagttacga ttggttcttaaaagcagacgacgacgcctacctcattatggaaaatctgcgtcatcttttggagagctacaattcccaga atgccgtgtatctaggtcatcacttccgtataggaacacgtcaaggatatatgtcaggtggaggcgggtttttattgagc gcgggagctttgaaagctatcaacgaaaaaggttatggggtagagcccatgtgtcaaatggatggtaaagacgaggatct tgatataggaatatgccttgatcatattggtgtgaaaacttattcgtccatagacaaatatggccgacaaagcttccatc cttttggtataatcaaatcactgacgtccagtattaccggcggtgagagttattactttgataggccaattaaagatgga cccgattgttgtagtcaactatcagtgtcttttcactacataaatccagtgcagatgtacttattagaattcatgcttta taaatccgttctccatgggaggcactatccaatcaaatccaaggataactttttcaaaccggaagtcgctactattccaa ataaggcagccaatgaaatcattcttccaccaaaatatttctggcatttcctcttcggcaggaggaagtatgttaacagt ggtaacaggaatggtagtgacctttatcttatagtatttgtgatattttatcagacactggttattgctaggtga |
|
Protein
| Protein ID | pfu_aug1.0_8329.1_38732.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8329.1_38732.t1 MRVRRRLVYRVTLAAAFLSFVYCTKKNAKYSRILCFVMTTPSNIATKAMAVNNTWGSRCDKLLFVNAEVITSLPTMVIEV EEGRDHLTKKTYKSLQYLYKHYVDSYDWFLKADDDAYLIMENLRHLLESYNSQNAVYLGHHFRIGTRQGYMSGGGGFLLS AGALKAINEKGYGVEPMCQMDGKDEDLDIGICLDHIGVKTYSSIDKYGRQSFHPFGIIKSLTSSITGGESYYFDRPIKDG PDCCSQLSVSFHYINPVQMYLLEFMLYKSVLHGRHYPIKSKDNFFKPEVATIPNKAANEIILPPKYFWHFLFGRRKYVNS GNRNGSDLYLIVFVIFYQTLVIAR |
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