Gene
| Gene Model ID | pfu_aug1.0_83295.1_56629 |
|---|---|
| Locus | scaffold83295.1 : 1 ... 1615 : - |
| To GenomeBrowser | scaffold83295.1:1..1615 |
| Genes list of scaffold | scaffold83295.1 |
| Synonym | pfu_aug2.0_835.1_17875 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_83295.1_56629.t1 | 1 | 1 | Linker_histone | 39 | 113 | 6.0e-27 | 93.5 | 8.0e-31 | 1.2e-26 | 92.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_83295.1_56629.t1 | gi|2842451|emb|CAA11816.1| | histone 1 [Mytilus edulis] | 7.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_83295.1_56629.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83295.1_56629.t1 atgtcagacgctgaagtagctgccccagctgaggctacgcccgtgaagaagggagcaaagacagcaaaaactgctactaa gaagaagtcaaagaacaagggcccaccaaaggatcatccaatgttcaaggatatgatcaaagatgccatcactgcgttga aggagagaggaggcagttcaagacaggcaattctgaaacacatcgttgcccactataacattaaagatcagaaagcagct aatgcacatctgaaaatggctctgcgtgcaggagtaaagaatggaaccctgaagcaggcaaaaggtactggagcttccgg ctcattcaagatgggagaagccaagaccaaatctcataaagccaaacctaaggcagagaaaaaggctgataaacccaaaa aggcagctgctcctaaaggagagaaaaaggcaaagaaagcaaagaaaccaaaaccagcaaaaagcaagccagcaaagaaa gtaaagacacccaaaaaggcagcagctaagaaacctaaaaaggcagctaaatctcccaaaaaggctaaaaaggcagctaa ggcctaa |
|
Protein
| Protein ID | pfu_aug1.0_83295.1_56629.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83295.1_56629.t1 MSDAEVAAPAEATPVKKGAKTAKTATKKKSKNKGPPKDHPMFKDMIKDAITALKERGGSSRQAILKHIVAHYNIKDQKAA NAHLKMALRAGVKNGTLKQAKGTGASGSFKMGEAKTKSHKAKPKAEKKADKPKKAAAPKGEKKAKKAKKPKPAKSKPAKK VKTPKKAAAKKPKKAAKSPKKAKKAAKA |
|