Gene
Gene Model ID | pfu_aug1.0_83367.1_05999 |
---|---|
Locus | scaffold83367.1 : 1 ... 2256 : + |
To GenomeBrowser | scaffold83367.1:1..2256 |
Genes list of scaffold | scaffold83367.1 |
Synonym | NA |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | CARP8 |
Description | reciprocal BLASTN hit to NCBI Accession AB557933 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_83367.1_05999.t1 | 1 | 1 | Carb_anhydrase | 2 | 152 | 0.0 | 156.3 | 0.0 | 1.4013e-45 | 156.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_83367.1_05999.t1 | gi|316998101|dbj|BAJ52887.1| | carbonic anhydrase-related protein VIII [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
8-16cell | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_83367.1_05999.t1 |
---|---|
Definition | - |
>pfu_aug1.0_83367.1_05999.t1 gttcagttggtgcattggaactccagtcagtaccagtcatatgagactgctctagggaaagactctggtgtagtgattct atctttatttgtccagatcggaaaagacaattctgggctgagatctttatttccagattccttgaatgaaatcgcataca agggtcgacagaagaccactaacgctccgttcaacccttcatgccttttaccagatattgagttacgggattattggacg tatgaaggctcgataaccattccgccatgttcagaaaaagtcacgtggattatatttcggtatccattaatgttatcggg agatcaggttgatgatttcaggcgtttgtatttgtaccaaaaaggcgagacgccacctggcggagcagaagggagattac tagacaacttccggcctgtgcaaccactgaacgataggattgttagatcgtcgtttcaatga |
Protein
Protein ID | pfu_aug1.0_83367.1_05999.t1 |
---|---|
Definition | - |
>pfu_aug1.0_83367.1_05999.t1 VQLVHWNSSQYQSYETALGKDSGVVILSLFVQIGKDNSGLRSLFPDSLNEIAYKGRQKTTNAPFNPSCLLPDIELRDYWT YEGSITIPPCSEKVTWIIFRYPLMLSGDQVDDFRRLYLYQKGETPPGGAEGRLLDNFRPVQPLNDRIVRSSFQ |