Gene
| Gene Model ID | pfu_aug1.0_83367.1_05999 |
|---|---|
| Locus | scaffold83367.1 : 1 ... 2256 : + |
| To GenomeBrowser | scaffold83367.1:1..2256 |
| Genes list of scaffold | scaffold83367.1 |
| Synonym | NA |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | CARP8 |
| Description | reciprocal BLASTN hit to NCBI Accession AB557933 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_83367.1_05999.t1 | 1 | 1 | Carb_anhydrase | 2 | 152 | 0.0 | 156.3 | 0.0 | 1.4013e-45 | 156.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_83367.1_05999.t1 | gi|316998101|dbj|BAJ52887.1| | carbonic anhydrase-related protein VIII [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_83367.1_05999.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83367.1_05999.t1 gttcagttggtgcattggaactccagtcagtaccagtcatatgagactgctctagggaaagactctggtgtagtgattct atctttatttgtccagatcggaaaagacaattctgggctgagatctttatttccagattccttgaatgaaatcgcataca agggtcgacagaagaccactaacgctccgttcaacccttcatgccttttaccagatattgagttacgggattattggacg tatgaaggctcgataaccattccgccatgttcagaaaaagtcacgtggattatatttcggtatccattaatgttatcggg agatcaggttgatgatttcaggcgtttgtatttgtaccaaaaaggcgagacgccacctggcggagcagaagggagattac tagacaacttccggcctgtgcaaccactgaacgataggattgttagatcgtcgtttcaatga |
|
Protein
| Protein ID | pfu_aug1.0_83367.1_05999.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83367.1_05999.t1 VQLVHWNSSQYQSYETALGKDSGVVILSLFVQIGKDNSGLRSLFPDSLNEIAYKGRQKTTNAPFNPSCLLPDIELRDYWT YEGSITIPPCSEKVTWIIFRYPLMLSGDQVDDFRRLYLYQKGETPPGGAEGRLLDNFRPVQPLNDRIVRSSFQ |
|