Gene
| Gene Model ID | pfu_aug1.0_8342.1_45844 |
|---|---|
| Locus | scaffold8342.1 : 62266 ... 92569 : + |
| To GenomeBrowser | scaffold8342.1:62266..92569 |
| Genes list of scaffold | scaffold8342.1 |
| Synonym | pfu_aug2.0_1626.1_21718 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8342.1_45844.t1 | 1 | 1 | zf-UBR | 26 | 85 | 3.4e-13 | 49.1 | 1.9e-16 | 9.2e-13 | 47.7 |
| pfu_aug1.0_8342.1_45844.t1 | 1 | 1 | ClpS | 67 | 117 | 4.2e-09 | 36.0 | 2.1e-12 | 1.0e-08 | 34.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8342.1_45844.t1 | gi|345480861|ref|XP_001606200.2| | PREDICTED: E3 ubiquitin-protein ligase UBR2 [Nasonia vitripennis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8342.1_45844.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8342.1_45844.t1 atggaatacttcctatgtaatggtgacccagatactgtattcaaacagctcaaagacttggattcaccgtccgccatttg tggaagagtgttcaagactggggaaccaacatattcctgcagggattgtgccaatgatccaacatgtgtattatgtatag actgcttccagaggagtgctcacaaaaaacatcgctacagggtgatcagtaccctacagagagccgtcgattgttcacat aaaaaagctatagagtatgctaccactgtagacagagagggaagaagctgtgttagagaaggcacattttcaaattgtga aaaagctcgccatgtgatagagcactatgcgatgctagttaaggactttgtgcaggacgaccattatcgccccgtttcca tcacgtcccattctgttcaaattttcacagtaggaactttgcactaccggaatttgatttggaactttacgcgggatgac catttccgtcctgtttcaatcacctatctttccatacaagtatttgccgtgggaacattgggtatggattctgtgatacg acagacagggatgcatctagaatacgaaccagaatgggagggtgcctttaacctacagctcaaacaggatgatgtcatag cagaattcctggaatggtgtggaacagatcgtgaggtgttgattgaagcctacaagatcacgttagagttattacttcag tgtaaggacaagcccgccacagtcaaaagggaggacaaaacagtccatggacagaaagcaagatgtctgaagtatgatgt atccacacagcccgtctcgatacatcttcccctatctcgtttcttagcaggtctgtatgtatatatggagaagttcggat tgtctttcaactgtgatgcactccagtcacaggcagtggatccagtggagttgatggagccaccactcagggtacaggtg atgatagctcaaacacaagctggtatgtggaggagaaacggatacgccttgctcaaccagatattcttttaccacaatgt gaagtgccgtagggagatgtttgacaaagatattgtcatgcttcagatttgtgcagctgtgatagatagtaacgagttct tgattcatctccttaacaagttcaacctcctatcttgggtcaaagtagagtatgatacaccatcaggtcaagacgacttg gttcgacaaaccatcacgttagccgaggaattcctcaatctactgatcattctcatagatgattcctttgtgttcacccc ttcctccatctcgtctataaccagaatgatggcaggaaacgttgctaagaactttcatctcctctggcattatgtctatg atgatgcaaggggaggtcatttttctgaaagtgttcgtgatatgctgagaaaatttgcaaaagatgtatactcagtaagt aacatgtctactacattgatttctgcaaaatttgtgagattaccagaaatagtatcacaagccctgaaaatggcaaagtt tggcctgggtgttctagcggatgacgctaatcagagggtgcctataatggcatggaatacctgcacctatacaatacaaa atatcgagcaattactgagattagagaacaagcctttgtttggagttttaccggcccggacgttagactgtatcaatgct ctagtcaagtttgccaccgtgtcgggtcagatcactcctgtagatgtgatgaagaagcactgtctgcgattattgtcagg ttacatggaggtggagcatgaagaagatgctagtcgtttgctcaagatctacgtcagtgttagacagaaagctgggtaa |
|
Protein
| Protein ID | pfu_aug1.0_8342.1_45844.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8342.1_45844.t1 MEYFLCNGDPDTVFKQLKDLDSPSAICGRVFKTGEPTYSCRDCANDPTCVLCIDCFQRSAHKKHRYRVISTLQRAVDCSH KKAIEYATTVDREGRSCVREGTFSNCEKARHVIEHYAMLVKDFVQDDHYRPVSITSHSVQIFTVGTLHYRNLIWNFTRDD HFRPVSITYLSIQVFAVGTLGMDSVIRQTGMHLEYEPEWEGAFNLQLKQDDVIAEFLEWCGTDREVLIEAYKITLELLLQ CKDKPATVKREDKTVHGQKARCLKYDVSTQPVSIHLPLSRFLAGLYVYMEKFGLSFNCDALQSQAVDPVELMEPPLRVQV MIAQTQAGMWRRNGYALLNQIFFYHNVKCRREMFDKDIVMLQICAAVIDSNEFLIHLLNKFNLLSWVKVEYDTPSGQDDL VRQTITLAEEFLNLLIILIDDSFVFTPSSISSITRMMAGNVAKNFHLLWHYVYDDARGGHFSESVRDMLRKFAKDVYSVS NMSTTLISAKFVRLPEIVSQALKMAKFGLGVLADDANQRVPIMAWNTCTYTIQNIEQLLRLENKPLFGVLPARTLDCINA LVKFATVSGQITPVDVMKKHCLRLLSGYMEVEHEEDASRLLKIYVSVRQKAG |
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