Gene
| Gene Model ID | pfu_aug1.0_8344.1_53158 |
|---|---|
| Locus | scaffold8344.1 : 22900 ... 37827 : - |
| To GenomeBrowser | scaffold8344.1:22900..37827 |
| Genes list of scaffold | scaffold8344.1 |
| Synonym | pfu_aug2.0_1420.1_01623 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8344.1_53158.t1 | 1 | 1 | TFIIF_beta | 3 | 105 | 4.8e-28 | 98.7 | 4.4e-32 | 6.5e-28 | 98.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8344.1_53158.t1 | gi|327283876|ref|XP_003226666.1| | 6.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8344.1_53158.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8344.1_53158.t1 aaagacttggtatagagggcaaagtcatacaaagagctgactgcaggccagaagctgataataattatctgaaactcaaa aggttacagttagaggcaaggaacaaaccccagagggaagtcaaacagctagatacagtggtacacaactataaacctat tcctgccaattttaacaccaaagataagtcaaaagaagtggccaaacgacagcgggcagagaaagaacaagttatggacc ttctatttaaagcttttgagaaacatcagtactacaatgtcaaagatcttgtcaacatcacaaaacagcccatttcaatc cgaaagtcatcagacttaccagacaaatctgaacgtaagcaaactttggggaaccgcacggtgtctgtgcgttatcagta cgtggtccgcatggcctccgtacggattgggaacaagcagacagtacctagcagttttaaaagcatgcagaactttcgtt gcgtcctgtctgcgttcggtctacagattcatcaaggagtacgacacgcacgttgtgtgtacgttgtaattacgtgcaac acaccctgtcgcgtaaaggagtga |
|
Protein
| Protein ID | pfu_aug1.0_8344.1_53158.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8344.1_53158.t1 RLGIEGKVIQRADCRPEADNNYLKLKRLQLEARNKPQREVKQLDTVVHNYKPIPANFNTKDKSKEVAKRQRAEKEQVMDL LFKAFEKHQYYNVKDLVNITKQPISIRKSSDLPDKSERKQTLGNRTVSVRYQYVVRMASVRIGNKQTVPSSFKSMQNFRC VLSAFGLQIHQGVRHARCVYVVITCNTPCRVKE |
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