Gene
| Gene Model ID | pfu_aug1.0_83486.1_63907 |
|---|---|
| Locus | scaffold83486.1 : 1 ... 2758 : - |
| To GenomeBrowser | scaffold83486.1:1..2758 |
| Genes list of scaffold | scaffold83486.1 |
| Synonym | NA |
Manual annotation
| Study field | Transcription Factors |
|---|---|
| Gene name | Pfu-HES6 |
| Description | Best hit to NP_066993 transcription factor HES-4 isoform 2 [Homo sapiens] with 1e-08 by a BLASTP search against NCBI Homo sapiens nr database. The predicted protein has one Hairy_orange domain and one WRPW motif in its C-terminus. This annotation is based on NJ, ML, and BI. pfu0_2_05010_03461 and pfudmixc37094g13675 were used for analyses. |
| mRNA evidence | pfudmixc37094g13675 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_83486.1_63907.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83486.1_63907.t1 aaaaataaatcaaagttggagaaagcagatattcttgagatggctgtggattttatcaagcggaaccgttacacacctga taaacagacagagcaaaaacaatccaaaaaggagtctgagcagcaactctatgtggcgggatataataaatgttgtcagg aactgaccgaaatgattgacgaaaaccaaaatatcccgggtgaaatgaaactaaaactaactagtcatcttcaaaactgc caagaaaagtcaaagaatggacagagcagcgacgaaggacgagacttgctgcagagggaagttttcaagcaattccaaac aataaaaccgaaaaccgttcctgaaaatacgacaaaggaacaaaacgtggtttcagaaaaagagaaatccagaaatgaag tatctacaacaagtcaaacttcaaatggtgctaatttccttctctgcaatacagcactgcctacatatatactggtgcca gcggctaccgtctgcaaaccgttgcacgtgcttcaacagcaacagacgacacctgtgaccgtcgtcaaccagcagcagac aacaaacaaaacaaatctaggacaatcttctatcaacatgctcgatttgaatgctttaaatttgcagcaaccacagtttg ttcaggtagaaaaaaatccctcgcaattcattccaaattttcttccaaatttgtcaactacccaaccactatttgtgccg tattctacgaactgtcatgtcccctctgttttaagttcaacatcagcacaaaggagtgttgtcccttcaaatccaacagc aagtttatcaaactgtcagcctttcttttctatacaactgcctaccccacaaacaggatccgaaaactcaagtatccaac aaagtctgcccagaccgtcttctcagtcctctgatactatgtggcgaccttggtga |
|
Protein
| Protein ID | pfu_aug1.0_83486.1_63907.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83486.1_63907.t1 KNKSKLEKADILEMAVDFIKRNRYTPDKQTEQKQSKKESEQQLYVAGYNKCCQELTEMIDENQNIPGEMKLKLTSHLQNC QEKSKNGQSSDEGRDLLQREVFKQFQTIKPKTVPENTTKEQNVVSEKEKSRNEVSTTSQTSNGANFLLCNTALPTYILVP AATVCKPLHVLQQQQTTPVTVVNQQQTTNKTNLGQSSINMLDLNALNLQQPQFVQVEKNPSQFIPNFLPNLSTTQPLFVP YSTNCHVPSVLSSTSAQRSVVPSNPTASLSNCQPFFSIQLPTPQTGSENSSIQQSLPRPSSQSSDTMWRPW |
|