Gene
| Gene Model ID | pfu_aug1.0_83506.1_06003 |
|---|---|
| Locus | scaffold83506.1 : 301 ... 2750 : - |
| To GenomeBrowser | scaffold83506.1:301..2750 |
| Genes list of scaffold | scaffold83506.1 |
| Synonym | pfu_aug2.0_599.1_30962 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_83506.1_06003.t1 | 1 | 1 | Amidase | 7 | 177 | 5.5e-24 | 84.8 | 4.5e-28 | 6.7e-24 | 84.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_83506.1_06003.t1 | gi|348545066|ref|XP_003460001.1| | PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial-like [Oreochromis niloticus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_83506.1_06003.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83506.1_06003.t1 gaataccatgcccctgggttgtcatctgatgtactcgctgcttggagacgtgcggcagacatgtttgaggaagccggagc ccgtgttagtgaggtctcgttaccgcacactcagtactccatatcgtgttatagtgttatatgtgctacagaggtggcct ctaacatggccaggtttgatggagtagaatttggtcatagggctggtgtagatgtttcaacagaagaactatacacagca acaagacatgaaggtttcaatgacattgttagaggacgcattctggcaggaaactttttcttgctcaagaagaattacga tgatttcttcttaaaagcacaaaaaatcagacgtttaatttccgaggattttaggcaggtgtttaactccggtattgatg tcctcctgacacctaccacactgacagaggcacctcagtatagctggttctcacaagctgatggtaggacgagaactcag gaacaagacgtttttactcaaccaataaatatggcaggtaagaagcgcattttttctgttcttgtaaaacctgtttgtaa ctattaa |
|
Protein
| Protein ID | pfu_aug1.0_83506.1_06003.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83506.1_06003.t1 EYHAPGLSSDVLAAWRRAADMFEEAGARVSEVSLPHTQYSISCYSVICATEVASNMARFDGVEFGHRAGVDVSTEELYTA TRHEGFNDIVRGRILAGNFFLLKKNYDDFFLKAQKIRRLISEDFRQVFNSGIDVLLTPTTLTEAPQYSWFSQADGRTRTQ EQDVFTQPINMAGKKRIFSVLVKPVCNY |
|