Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_83662.1_27836
Locus scaffold83662.1 : 8 ... 2671 : +
To GenomeBrowser scaffold83662.1:8..2671
Genes list of scaffold scaffold83662.1
Synonym pfu_aug2.0_1479.1_31708

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_83662.1_27836.t1 1 1 HMG_box 1 36 8.7e-06 25.9 3.5e-09 1.8e-05 24.9

Transcript
Transcript IDpfu_aug1.0_83662.1_27836.t1
Definition-
>pfu_aug1.0_83662.1_27836.t1
atgctgggtgccaagtggcggagaatgagccaggaagagaaagaaccgtacgagacggaatttcgaaacgacattgagga
tctgaagaagaggcaccctgaatggcgttatgctccaatgaagcggctcagtcacgaccagctggaaccaatgccaagca
gactccgaccacgtgacaaactaaagagaaagtttccggtttccattgcaaagggcatacaactccctcgactgtcccct
ccaaagacaaagagtgctacaacgaagaaaagaggaaaaccaaaaagggacagaaacaataaaaccttactcggattccg
ttggatgcaatgctgtgtctgtttaaaatggagatacgtacctttcttcagtaacacgccgaggaaggagtccaattctt
tttgccgcacgttgaatgcgttataccatggctataaggtcgttgtgaacacgccagtcgccatgcgctccgctatccgt
gtgccgagcgacctcgatcctaacgactccacaacttatgattggatgctgggcagtcgtcggcggtttatgcatgtaca
aaattttcatgacgttcacaacgcacgtcagcgtcctctaacgttcatccagcaaccacacaacgacaacgaccagttat
tcgacgcattttaa

Protein
Protein IDpfu_aug1.0_83662.1_27836.t1
Definition-
>pfu_aug1.0_83662.1_27836.t1
MLGAKWRRMSQEEKEPYETEFRNDIEDLKKRHPEWRYAPMKRLSHDQLEPMPSRLRPRDKLKRKFPVSIAKGIQLPRLSP
PKTKSATTKKRGKPKRDRNNKTLLGFRWMQCCVCLKWRYVPFFSNTPRKESNSFCRTLNALYHGYKVVVNTPVAMRSAIR
VPSDLDPNDSTTYDWMLGSRRRFMHVQNFHDVHNARQRPLTFIQQPHNDNDQLFDAF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495