Gene
| Gene Model ID | pfu_aug1.0_8368.1_45848 |
|---|---|
| Locus | scaffold8368.1 : 6488 ... 36215 : - |
| To GenomeBrowser | scaffold8368.1:6488..36215 |
| Genes list of scaffold | scaffold8368.1 |
| Synonym | pfu_aug2.0_1109.1_31443 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8368.1_45848.t1 | 4 | 1 | Clathrin | 289 | 323 | 2.5e-06 | 27.1 | 0.0019 | 2.6 | 7.6 |
| pfu_aug1.0_8368.1_45848.t1 | 4 | 2 | Clathrin | 369 | 417 | 2.5e-06 | 27.1 | 0.026 | 34.0 | 3.9 |
| pfu_aug1.0_8368.1_45848.t1 | 3 | 1 | TPR_12 | 393 | 434 | 9.9e-06 | 25.4 | 2.2e-05 | 0.03 | 14.2 |
| pfu_aug1.0_8368.1_45848.t1 | 4 | 3 | Clathrin | 448 | 518 | 2.5e-06 | 27.1 | 0.0053 | 7.1 | 6.2 |
| pfu_aug1.0_8368.1_45848.t1 | 3 | 2 | TPR_12 | 468 | 493 | 9.9e-06 | 25.4 | 0.2 | 270.0 | 1.5 |
| pfu_aug1.0_8368.1_45848.t1 | 4 | 4 | Clathrin | 530 | 597 | 2.5e-06 | 27.1 | 0.0038 | 5.1 | 6.6 |
| pfu_aug1.0_8368.1_45848.t1 | 3 | 3 | TPR_12 | 546 | 605 | 9.9e-06 | 25.4 | 0.00084 | 1.1 | 9.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8368.1_45848.t1 | gi|115665183|ref|XP_793895.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8368.1_45848.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8368.1_45848.t1 atgtccaatttatcctataaagaagccattgattctgactctggagtactgatggtatggaaagctgatgctaagggtcg actacagcagaatcctctacatcaacatcatatacaggagcctctgtgccgtatgattgacataaatcagctagctcgtg ctgcagtcagtggagatgagagtgctcttgaaatgtttgtgtggaagcggggtaaaaacaacaagacagctacggcttat actggtcctaatgagtcgctaacattctttgtaggaggacagtccgaagtggattctgtgtcatactttaactttgagag tggtagaggagagcaagatgacttccctccggaacagatagagggcgtggaaggggacacaaatgatgctgaaagaggta aaaatcaagcagctaaggacattgcgggtagatatccagtgtcccattattgggatcaacatgaaccgaagctgattgtg tgtgaggctcgggtcctagccagtgctgtacagaaaaaggtggaggaggacaagaaaaaacctccatcattatcaaagtc tatggatgaaggaattgttgagttcatggttgtttcattattcagtacaccagagaatggtatactaatccaggataact tctctctaccagaactgtatcaggctttattaggtgtagaagtaccatattattacttcatcaaaaagtcagagaacacc caggaagatgagaatacaccagataatgtgatcagaacagaaggtgtttctccgagaatggtagctcgtaaaactatgag agactttgttggtctggaaagcagtgataaagggacaaaagatgccatgttaaacttcagttattaccttactattggta acatggatgaagcattcaagtccataaaactgatcaaaagtgaatcagtatgggagaatatggcaaagatgtgtgtaaag agtcggagacttgatgtagccagtgtatgcctgggtaatatgggacatgcccgtggggctaaggctctcagagaagctat gaaggaacctgagcttgatgctaaagtggcagtcctggccatgcagttaggattaaaggaggatgcagaaagacttttga agaattgtaagagatatgatttgttaaatgagttttatcagtctgggggacagtggaagaaagcactagagacggcagag atgtacgacaggatacacctcagaacgacgtattataactttgctaaacatctagagatgaaaggagaattatcagaagc cataccaaactttgagaaatccgatacacatagatttgaagttcccagaatgctatttgatgagccagaggcattggaag gttacatcagcagacataaagacaaagcactgcacaaatggtgggcacagtacatggagagtacaggagagatggagaca gctttacagttctatgagaatgcccaggattatctgtccttagtcagagtttactgttactgtggacagatggataagga gcatggttatgaggatcagctgatgaatctggcattgatgggacgacctgaggacatgatagaggcagctcgttattatg aacagaaacccggagcgcaggacaaagctgtcatgctctatcacaaggcaggaaatttctccaaggctttggacttgtct ttccgagctcgtcagtttggtgctctccagttgatatctggggaattagacgagagggctgatcctgagttactaaaacg atgtggtgacttctttatggagaacggacagtacgacaaagctgtggatctactggccattggtaaaaaggcttatgctg cattagaggagatgagaagtaagataccccatgtgaatgtaggttattatgttaatatgaagacagtagaggctgtgcac aaagctttagacattccattaagtaaaacgatcacgtcgaagatgaacggagtgatgcaggatgaggaggatggagagat tgtagaagaggaagtggacaatatatacggacaggatgatcttatttga |
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Protein
| Protein ID | pfu_aug1.0_8368.1_45848.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8368.1_45848.t1 MSNLSYKEAIDSDSGVLMVWKADAKGRLQQNPLHQHHIQEPLCRMIDINQLARAAVSGDESALEMFVWKRGKNNKTATAY TGPNESLTFFVGGQSEVDSVSYFNFESGRGEQDDFPPEQIEGVEGDTNDAERGKNQAAKDIAGRYPVSHYWDQHEPKLIV CEARVLASAVQKKVEEDKKKPPSLSKSMDEGIVEFMVVSLFSTPENGILIQDNFSLPELYQALLGVEVPYYYFIKKSENT QEDENTPDNVIRTEGVSPRMVARKTMRDFVGLESSDKGTKDAMLNFSYYLTIGNMDEAFKSIKLIKSESVWENMAKMCVK SRRLDVASVCLGNMGHARGAKALREAMKEPELDAKVAVLAMQLGLKEDAERLLKNCKRYDLLNEFYQSGGQWKKALETAE MYDRIHLRTTYYNFAKHLEMKGELSEAIPNFEKSDTHRFEVPRMLFDEPEALEGYISRHKDKALHKWWAQYMESTGEMET ALQFYENAQDYLSLVRVYCYCGQMDKEHGYEDQLMNLALMGRPEDMIEAARYYEQKPGAQDKAVMLYHKAGNFSKALDLS FRARQFGALQLISGELDERADPELLKRCGDFFMENGQYDKAVDLLAIGKKAYAALEEMRSKIPHVNVGYYVNMKTVEAVH KALDIPLSKTITSKMNGVMQDEEDGEIVEEEVDNIYGQDDLI |
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