Gene
| Gene Model ID | pfu_aug1.0_8368.1_45849 |
|---|---|
| Locus | scaffold8368.1 : 37596 ... 59841 : + |
| To GenomeBrowser | scaffold8368.1:37596..59841 |
| Genes list of scaffold | scaffold8368.1 |
| Synonym | pfu_aug2.0_1109.1_31444 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8368.1_45849.t1 | 1 | 1 | Cupin_8 | 156 | 325 | 7.4e-08 | 32.1 | 9.8e-12 | 1.5e-07 | 31.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8368.1_45849.t1 | gi|291223750|ref|XP_002731871.1| | PREDICTED: uncharacterized protein LOC100374815 [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8368.1_45849.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8368.1_45849.t1 atgaaaagaaataaagtggaaacaaacggagtgactgagagacatcaatcaaacggtgactttcagaaagaaaacggaga aaagactaatgataccaaagggaactgtgaaaaactttataaaaagttttgcgatttaaaacagaaagcaataagtgacg gattaacgaaggaggaagtatgtgatgtgtttagagggaaggtgatcaaggagccggggtgggtgttacacctgaccgta ccccagctagtggctctgtccctggccgtcgcagtggccgttatggcgatggcagggggtgtcatcaagtatttcgaact ggacgaagaactcacacatttgataagagaatctcgttgtatcgttgataatagtggttttatgattgaaattgccagac caaagacaaattgtaatatgtgtaagaatctcaaatctgttcccatagaaacgaacatcacccgagacatttttgcggag aagtacgcgtacactgcggtaccagttctcataaaacatgccactcttgactggacggcaatgggcaattttagtttcca tttctttcaagatttgtacaaaaatacaaaaggtgctttggacaaagtggaggacgaatgtcagttttttccttataaga cagagtttgactcgctgggagaagttttcaatatgtctgacgacagagcggcttttaaggagggagagaaaccatggtat ataggatggagtaactgtcataatgacgtagccaaggtcctcagacagcattaccaaagaccattcttcataccgtccga ctcagagtccagttcaatagactggatattcatgggaggaaccggactaggggctttcgttcatttggattacgtacaga gaccttcatggcaagcccagatatccggagagaagacatggacattgatccccacaccagaatgtgaacatgtttgttat tctatgaatgtaacagtcagtaaaggcgatataagcaaagtgggtagtctttcagattacaagatgaccatgatgagaaa taaaatggaaacaaatggagtgactaagaaacgtcgatcaaatgacgattattatggagaaaatacgaaaaatacagact ttggcacgaagacacactatggaaacctttattatgatttaaaacagaaagcaatacgtgacggattaacgaatgaagaa gtatttgacgtcagacggtgtgtgtattcagacgggaggtga |
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Protein
| Protein ID | pfu_aug1.0_8368.1_45849.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8368.1_45849.t1 MKRNKVETNGVTERHQSNGDFQKENGEKTNDTKGNCEKLYKKFCDLKQKAISDGLTKEEVCDVFRGKVIKEPGWVLHLTV PQLVALSLAVAVAVMAMAGGVIKYFELDEELTHLIRESRCIVDNSGFMIEIARPKTNCNMCKNLKSVPIETNITRDIFAE KYAYTAVPVLIKHATLDWTAMGNFSFHFFQDLYKNTKGALDKVEDECQFFPYKTEFDSLGEVFNMSDDRAAFKEGEKPWY IGWSNCHNDVAKVLRQHYQRPFFIPSDSESSSIDWIFMGGTGLGAFVHLDYVQRPSWQAQISGEKTWTLIPTPECEHVCY SMNVTVSKGDISKVGSLSDYKMTMMRNKMETNGVTKKRRSNDDYYGENTKNTDFGTKTHYGNLYYDLKQKAIRDGLTNEE VFDVRRCVYSDGR |
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