Gene
Gene Model ID | pfu_aug1.0_838.1_00510 |
---|---|
Locus | scaffold838.1 : 12195 ... 14415 : - |
To GenomeBrowser | scaffold838.1:12195..14415 |
Genes list of scaffold | scaffold838.1 |
Synonym | pfu_aug2.0_883.1_11268 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_838.1_00510.t1 | 1 | 1 | C1q | 69 | 183 | 5.0e-21 | 75.0 | 8.2e-25 | 6.1e-21 | 74.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_838.1_00510.t1 |
---|---|
Definition | - |
>pfu_aug1.0_838.1_00510.t1 atggtctccgtctatttgtccgatttactcgtgagaaagttctgtttgttatttacttttcaagaattggatattttcgg aagttctattttccaagatcctatcggaggccctagtccgaaagcatttacatcgcatgatataaagaaacacgaagtgc ctgggagtaacataagaagggatgttggatttctctgtagtatatctggcaacttgaatttgaaagccaactcggcgatt caattcgacaaggtagtgagaaatgctggacacggctatagtgagaagactggtatttttacagcgccagtcggagggct ttaccatttttactggtcctctcttgcatacaaaaccagtgactttgatataactctgatgcataacggtacgagagtga gtcgtagttatgttgaacctagatcctcgtatgaccacgctagtaacacagtatatctaagaataaagaaaaaagacacc atttttctgcagacatttcataacggtatgcttcataccggtctatacacgacatttggaggagagctcattagatatta g |
Protein
Protein ID | pfu_aug1.0_838.1_00510.t1 |
---|---|
Definition | - |
>pfu_aug1.0_838.1_00510.t1 MVSVYLSDLLVRKFCLLFTFQELDIFGSSIFQDPIGGPSPKAFTSHDIKKHEVPGSNIRRDVGFLCSISGNLNLKANSAI QFDKVVRNAGHGYSEKTGIFTAPVGGLYHFYWSSLAYKTSDFDITLMHNGTRVSRSYVEPRSSYDHASNTVYLRIKKKDT IFLQTFHNGMLHTGLYTTFGGELIRY |