Gene
Gene Model ID | pfu_aug1.0_838.1_00512 |
---|---|
Locus | scaffold838.1 : 44766 ... 49382 : + |
To GenomeBrowser | scaffold838.1:44766..49382 |
Genes list of scaffold | scaffold838.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_838.1_00512.t1 | 5 | 1 | WD40 | 76 | 102 | 5.8e-07 | 29.1 | 0.071 | 1100.0 | -0.3 |
pfu_aug1.0_838.1_00512.t1 | 5 | 2 | WD40 | 141 | 162 | 5.8e-07 | 29.1 | 0.083 | 1200.0 | -0.5 |
pfu_aug1.0_838.1_00512.t1 | 5 | 3 | WD40 | 168 | 205 | 5.8e-07 | 29.1 | 2.2e-07 | 0.0033 | 17.2 |
pfu_aug1.0_838.1_00512.t1 | 5 | 4 | WD40 | 221 | 247 | 5.8e-07 | 29.1 | 0.0056 | 82.0 | 3.3 |
pfu_aug1.0_838.1_00512.t1 | 5 | 5 | WD40 | 509 | 540 | 5.8e-07 | 29.1 | 0.041 | 600.0 | 0.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_838.1_00512.t1 | gi|332028571|gb|EGI68608.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_838.1_00512.t1 |
---|---|
Definition | - |
>pfu_aug1.0_838.1_00512.t1 atgcctttgatgaacgtagaatttggagaagatggtcttacctatctcattgtgaagagtggtgcagattcggataccga catggctttagaagtcgccgataaatcagtggaaccgtttgagttccacagtgcagttgctgtcgcgaaggacaagtccg tagtgtatggctgcatagcgattagtgacaatgctgtagctgtatataaacgcgaggaaaacgtttggaagtacgatcga acactgggtgataattatgaccgcgtattctcactcaccctatcttttgatgaaaattacttggtcgcaacgatcgctct tggattcaaactttggaatctgaaaaatgattctttggtacaactcaaacttcctccaggaactagaaatattccgaata aaaatcctctattgtccgtggttgtgttcacaaagaacaatcattttgtagtggctgctgtcagaaagaacttatacgtt tgggatacgaaacaagggaatatggtgaaagttttggacgctcatttcggtagaatcatagcattgggcgctgttacgtc tggaagtaacaaagtggtatcctcatcaatagacaaaacaatcaaggtttggaatttcgacaatatcctggaggatgttc attctatcgacagacttgagaaaccaatcgaacacattcacttagcagaggaatcccatttcgcggtcacaacgagtcga aactgtgttggagtttggaatcttggcacgggaaaactcgaacacacattagaaacgaaatctgtcgtcacattagctag gataaacaaagacgcgtccattgtcgccgcagcggaggctagtcagatccttatatgggacgtcacgaaagagaaggcgt caaaaacgttgccacagaaggacgtacggcaactgttattgacagaggaagatacacgagtcgtggctctgtcgacagtt cctggcaacaaagggctttgtaaagcgtactccttccctgaaggggaagatgtgtatatgatagaatacaccttcaagaa atttcgaaaaggagcgatcacgaaagagggaacgttcctagctatacctgcctctgacaaaagcggagatgtgttaggag tgtaccatgcgaaaaatggtacacatttgtacaatctgcaactgaagtacgcaaattataaagaacttaccagcgtgctg gctatgccgcatgatacaaaccaagtagtcgttgttgacgatgaaaagggcaatgtgctagacttgaaaaagaaaacact agtgaggtccgtcatgcgatggaacggcatgaccatgaaaactggcaagcatggtctgttcgcgccatcaagaggtggcc ttgaacttttggaattgaaaacaggaaagacaactcgaacatttattcctcgcgttgcagaaggagtgttcagtatagat gtcatgtttaccaagaatgataaacacgtggtctattatcattctggacataggacaattcgtgttttcagagtttcgga tggcaaacgaattgctaattttaaggcgcatgcggaagtgacgtacatgacgggaacaacggaaggggaaactctcgtta taggggcggtagacggaagttttaccgtattgacaattgctgatcctgaatatgaagagaatgtggaattcttgaaaaat cttccaagtcgacgagttcaaaagggtacgactcaaaatggttacgtaacaaccacaaatgcaaacggggaggtggttaa tttggtaacagggaagaacagtatgggaacggcattgcaagtagcgcgttttgtcgcaaaagcgcgtggtgcacaacgat caagagcctgtgtgatatcataa |
Protein
Protein ID | pfu_aug1.0_838.1_00512.t1 |
---|---|
Definition | - |
>pfu_aug1.0_838.1_00512.t1 MPLMNVEFGEDGLTYLIVKSGADSDTDMALEVADKSVEPFEFHSAVAVAKDKSVVYGCIAISDNAVAVYKREENVWKYDR TLGDNYDRVFSLTLSFDENYLVATIALGFKLWNLKNDSLVQLKLPPGTRNIPNKNPLLSVVVFTKNNHFVVAAVRKNLYV WDTKQGNMVKVLDAHFGRIIALGAVTSGSNKVVSSSIDKTIKVWNFDNILEDVHSIDRLEKPIEHIHLAEESHFAVTTSR NCVGVWNLGTGKLEHTLETKSVVTLARINKDASIVAAAEASQILIWDVTKEKASKTLPQKDVRQLLLTEEDTRVVALSTV PGNKGLCKAYSFPEGEDVYMIEYTFKKFRKGAITKEGTFLAIPASDKSGDVLGVYHAKNGTHLYNLQLKYANYKELTSVL AMPHDTNQVVVVDDEKGNVLDLKKKTLVRSVMRWNGMTMKTGKHGLFAPSRGGLELLELKTGKTTRTFIPRVAEGVFSID VMFTKNDKHVVYYHSGHRTIRVFRVSDGKRIANFKAHAEVTYMTGTTEGETLVIGAVDGSFTVLTIADPEYEENVEFLKN LPSRRVQKGTTQNGYVTTTNANGEVVNLVTGKNSMGTALQVARFVAKARGAQRSRACVIS |