Gene
| Gene Model ID | pfu_aug1.0_838.1_00512 |
|---|---|
| Locus | scaffold838.1 : 44766 ... 49382 : + |
| To GenomeBrowser | scaffold838.1:44766..49382 |
| Genes list of scaffold | scaffold838.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_838.1_00512.t1 | 5 | 1 | WD40 | 76 | 102 | 5.8e-07 | 29.1 | 0.071 | 1100.0 | -0.3 |
| pfu_aug1.0_838.1_00512.t1 | 5 | 2 | WD40 | 141 | 162 | 5.8e-07 | 29.1 | 0.083 | 1200.0 | -0.5 |
| pfu_aug1.0_838.1_00512.t1 | 5 | 3 | WD40 | 168 | 205 | 5.8e-07 | 29.1 | 2.2e-07 | 0.0033 | 17.2 |
| pfu_aug1.0_838.1_00512.t1 | 5 | 4 | WD40 | 221 | 247 | 5.8e-07 | 29.1 | 0.0056 | 82.0 | 3.3 |
| pfu_aug1.0_838.1_00512.t1 | 5 | 5 | WD40 | 509 | 540 | 5.8e-07 | 29.1 | 0.041 | 600.0 | 0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_838.1_00512.t1 | gi|332028571|gb|EGI68608.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_838.1_00512.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_838.1_00512.t1 atgcctttgatgaacgtagaatttggagaagatggtcttacctatctcattgtgaagagtggtgcagattcggataccga catggctttagaagtcgccgataaatcagtggaaccgtttgagttccacagtgcagttgctgtcgcgaaggacaagtccg tagtgtatggctgcatagcgattagtgacaatgctgtagctgtatataaacgcgaggaaaacgtttggaagtacgatcga acactgggtgataattatgaccgcgtattctcactcaccctatcttttgatgaaaattacttggtcgcaacgatcgctct tggattcaaactttggaatctgaaaaatgattctttggtacaactcaaacttcctccaggaactagaaatattccgaata aaaatcctctattgtccgtggttgtgttcacaaagaacaatcattttgtagtggctgctgtcagaaagaacttatacgtt tgggatacgaaacaagggaatatggtgaaagttttggacgctcatttcggtagaatcatagcattgggcgctgttacgtc tggaagtaacaaagtggtatcctcatcaatagacaaaacaatcaaggtttggaatttcgacaatatcctggaggatgttc attctatcgacagacttgagaaaccaatcgaacacattcacttagcagaggaatcccatttcgcggtcacaacgagtcga aactgtgttggagtttggaatcttggcacgggaaaactcgaacacacattagaaacgaaatctgtcgtcacattagctag gataaacaaagacgcgtccattgtcgccgcagcggaggctagtcagatccttatatgggacgtcacgaaagagaaggcgt caaaaacgttgccacagaaggacgtacggcaactgttattgacagaggaagatacacgagtcgtggctctgtcgacagtt cctggcaacaaagggctttgtaaagcgtactccttccctgaaggggaagatgtgtatatgatagaatacaccttcaagaa atttcgaaaaggagcgatcacgaaagagggaacgttcctagctatacctgcctctgacaaaagcggagatgtgttaggag tgtaccatgcgaaaaatggtacacatttgtacaatctgcaactgaagtacgcaaattataaagaacttaccagcgtgctg gctatgccgcatgatacaaaccaagtagtcgttgttgacgatgaaaagggcaatgtgctagacttgaaaaagaaaacact agtgaggtccgtcatgcgatggaacggcatgaccatgaaaactggcaagcatggtctgttcgcgccatcaagaggtggcc ttgaacttttggaattgaaaacaggaaagacaactcgaacatttattcctcgcgttgcagaaggagtgttcagtatagat gtcatgtttaccaagaatgataaacacgtggtctattatcattctggacataggacaattcgtgttttcagagtttcgga tggcaaacgaattgctaattttaaggcgcatgcggaagtgacgtacatgacgggaacaacggaaggggaaactctcgtta taggggcggtagacggaagttttaccgtattgacaattgctgatcctgaatatgaagagaatgtggaattcttgaaaaat cttccaagtcgacgagttcaaaagggtacgactcaaaatggttacgtaacaaccacaaatgcaaacggggaggtggttaa tttggtaacagggaagaacagtatgggaacggcattgcaagtagcgcgttttgtcgcaaaagcgcgtggtgcacaacgat caagagcctgtgtgatatcataa |
|
Protein
| Protein ID | pfu_aug1.0_838.1_00512.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_838.1_00512.t1 MPLMNVEFGEDGLTYLIVKSGADSDTDMALEVADKSVEPFEFHSAVAVAKDKSVVYGCIAISDNAVAVYKREENVWKYDR TLGDNYDRVFSLTLSFDENYLVATIALGFKLWNLKNDSLVQLKLPPGTRNIPNKNPLLSVVVFTKNNHFVVAAVRKNLYV WDTKQGNMVKVLDAHFGRIIALGAVTSGSNKVVSSSIDKTIKVWNFDNILEDVHSIDRLEKPIEHIHLAEESHFAVTTSR NCVGVWNLGTGKLEHTLETKSVVTLARINKDASIVAAAEASQILIWDVTKEKASKTLPQKDVRQLLLTEEDTRVVALSTV PGNKGLCKAYSFPEGEDVYMIEYTFKKFRKGAITKEGTFLAIPASDKSGDVLGVYHAKNGTHLYNLQLKYANYKELTSVL AMPHDTNQVVVVDDEKGNVLDLKKKTLVRSVMRWNGMTMKTGKHGLFAPSRGGLELLELKTGKTTRTFIPRVAEGVFSID VMFTKNDKHVVYYHSGHRTIRVFRVSDGKRIANFKAHAEVTYMTGTTEGETLVIGAVDGSFTVLTIADPEYEENVEFLKN LPSRRVQKGTTQNGYVTTTNANGEVVNLVTGKNSMGTALQVARFVAKARGAQRSRACVIS |
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