Gene
| Gene Model ID | pfu_aug1.0_83919.1_56648 |
|---|---|
| Locus | scaffold83919.1 : 1 ... 2617 : - |
| To GenomeBrowser | scaffold83919.1:1..2617 |
| Genes list of scaffold | scaffold83919.1 |
| Synonym | pfu_aug2.0_240.1_00482 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_83919.1_56648.t1 | 4 | 1 | TPR_19 | 5 | 41 | 9.6e-06 | 25.8 | 0.00049 | 0.45 | 10.8 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 1 | TPR_14 | 6 | 42 | 4.3e-12 | 45.5 | 2.6e-05 | 0.025 | 15.2 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 1 | HAT | 8 | 15 | 2.4e-09 | 36.7 | 0.081 | 75.0 | 3.2 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 2 | TPR_19 | 17 | 65 | 9.6e-06 | 25.8 | 0.00087 | 0.81 | 10.0 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 2 | TPR_14 | 40 | 67 | 4.3e-12 | 45.5 | 0.056 | 52.0 | 4.8 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 2 | HAT | 52 | 82 | 2.4e-09 | 36.7 | 2.8e-06 | 0.0026 | 17.4 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 3 | TPR_14 | 74 | 99 | 4.3e-12 | 45.5 | 0.00046 | 0.42 | 11.3 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 3 | TPR_19 | 75 | 104 | 9.6e-06 | 25.8 | 0.029 | 27.0 | 5.1 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 4 | TPR_19 | 86 | 140 | 9.6e-06 | 25.8 | 8.1e-05 | 0.075 | 13.3 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 3 | HAT | 88 | 96 | 2.4e-09 | 36.7 | 0.054 | 50.0 | 3.7 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 4 | TPR_14 | 110 | 137 | 4.3e-12 | 45.5 | 0.0007 | 0.65 | 10.7 |
| pfu_aug1.0_83919.1_56648.t1 | 4 | 4 | HAT | 123 | 152 | 2.4e-09 | 36.7 | 6.5e-06 | 0.006 | 16.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_83919.1_56648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83919.1_56648.t1 gtcttcacatttgctaagatctggttactttttgctcagtttgaaattaggcagaaaaatttacaaggtgccaggaaggt tctgggaacagctgttgggaaatgtccaaaaaacaagttatacagaggttacatagaactggaactccaactcagagagt ttgagagatgtcgtattttatatgaaaaattcctggaatttggatcagaaaactgtacaacttggatgaagtacgctgag ttagagacaattctaggtgatattgaccgagcagaggccatatatgagctcgccatcaaccagcctaagctagacatgcc agaggtcctgtggaaagcctatatagacttccagatagaacaagaggagtatgataaaacaagagcattatacaggaggc tactggaacgcacacaccatgtcaaggtttggatcagttttgctcattttgagaagtctatagagacagaggaccggtta gagaatacaaggaaggtgtacagtgacgctaacaaagcactgaagaaagccggagaaaaggaggagagacttatgttgtt agaatcatggcaggagtttgagtcccctaccgtcaacgccgaaggggactcttag |
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Protein
| Protein ID | pfu_aug1.0_83919.1_56648.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_83919.1_56648.t1 VFTFAKIWLLFAQFEIRQKNLQGARKVLGTAVGKCPKNKLYRGYIELELQLREFERCRILYEKFLEFGSENCTTWMKYAE LETILGDIDRAEAIYELAINQPKLDMPEVLWKAYIDFQIEQEEYDKTRALYRRLLERTHHVKVWISFAHFEKSIETEDRL ENTRKVYSDANKALKKAGEKEERLMLLESWQEFESPTVNAEGDS |
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