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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8394.1_09754
Locus scaffold8394.1 : 1 ... 8791 : +
To GenomeBrowser scaffold8394.1:1..8791
Genes list of scaffold scaffold8394.1
Synonym pfu_aug2.0_38.1_26713

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_8394.1_09754.t1 gi|241742595|ref|XP_002412393.1| integrator complex subunit, putative [Ixodes scapularis] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_8394.1_09754.t1
Definition-
>pfu_aug1.0_8394.1_09754.t1
gaaagtaaatgatgagaaaatgaacacatacagagacttttgcaagagtcttgacaacaaagacttggagtcatgtctta
taagcgatttaaagctatgtcaagaagatgatgttaggttgtttacattcttggtgcctgatatatatacaaatttttcc
aacatagctattggtaatgcagagctacttcaaatgatagtatcagcgattgatggaactcagctccaggagttgatctg
ccagatattacagggtcatctcatcatgttccgcaaagattcatttctctcagtgttaaatgctagtttagactgggaga
cattagaacaatattttctgtggcagttaatagcggctcacaatataccggtggactatgtgatgccagtccttcctaaa
ctggactttacctcacatgcagaggcactctcaagcattttagttcttctaaagcaagaatgtccctctccagatctgat
cagaccggtgctttgtagagaatgtaaaagaactgattattttgctgtgtctatactgaaatactgggctcaggaatatg
aagataaattagcagaacttatcctatctcaggttaccaagttaaatggaacaccaaagaaaagacagaggatgaggaaa
ttaaaccaaaagccaagcgacggaaaaaagtgttaccagttgatgaagatagtgactgaatttttaatctcaaaagcatg
tgatacaagttccattcaagtacataataaatttgcatgtatctcaactgcatttacaattaactctttatgtacttatt
ag

Protein
Protein IDpfu_aug1.0_8394.1_09754.t1
Definition-
>pfu_aug1.0_8394.1_09754.t1
KVNDEKMNTYRDFCKSLDNKDLESCLISDLKLCQEDDVRLFTFLVPDIYTNFSNIAIGNAELLQMIVSAIDGTQLQELIC
QILQGHLIMFRKDSFLSVLNASLDWETLEQYFLWQLIAAHNIPVDYVMPVLPKLDFTSHAEALSSILVLLKQECPSPDLI
RPVLCRECKRTDYFAVSILKYWAQEYEDKLAELILSQVTKLNGTPKKRQRMRKLNQKPSDGKKCYQLMKIVTEFLISKAC
DTSSIQVHNKFACISTAFTINSLCTY

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