Gene
| Gene Model ID | pfu_aug1.0_8403.1_38753 |
|---|---|
| Locus | scaffold8403.1 : 14106 ... 18039 : + |
| To GenomeBrowser | scaffold8403.1:14106..18039 |
| Genes list of scaffold | scaffold8403.1 |
| Synonym | pfu_aug2.0_220.1_00455 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8403.1_38753.t1 | 2 | 1 | RVT_1 | 30 | 161 | 1.3e-16 | 60.6 | 2.4e-20 | 3.5e-16 | 59.2 |
| pfu_aug1.0_8403.1_38753.t1 | 2 | 2 | RVT_1 | 165 | 194 | 1.3e-16 | 60.6 | 0.31 | 4600.0 | -3.3 |
Transcript
| Transcript ID | pfu_aug1.0_8403.1_38753.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8403.1_38753.t1 atggtcgttgtaaagaaaaaaagtcgcgtgcgtatatgtatagatccgagggatcaaaatcgagcgattaaaagggaaca ttttccaatgaaaacagtggaagacgtcgccgtgaagctacaaggagcgaaagtatttagcactttggacgcgtcttcgg gattttggacaatagaacttgacgaggatagttctatgaaaactacttttaataatccgttcggaaggtataagaacaga aggatgcctttcgggataagttctgcaccggaagtgttccagaaacggatttccgaaatatttgacgacatggaaagttg cgaggcgatcatggatgatgttcttatatggggagaaacgatagagcaacacaacaaaaggctacggatagtgttagaga gagtcagggccgcaaaccttaaactgaataagcaaaaatgcaagacatctctcacggaagtgaaatacatgggccatata ataggatccgacggcttaaaaacagacccagataaaattgacgccattacctcaatgtctgagccgaattgcaaaaaaga actgcagcgatttatgggcatggtaaactatttgggcaaattcgtaaggaatttatccgacataaatcagccgctacgag tgcttttggaaaaatatatttcctggcactgggatgagagacacgcaaattctttcaaggctttaaagaaagcgctgaca gaatcgcccgtattacaatactatgaccaaagaaagcctgtaaccttgtcagttgacgcttcgtcacagagactcggagc atgcctgttataa |
|
Protein
| Protein ID | pfu_aug1.0_8403.1_38753.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8403.1_38753.t1 MVVVKKKSRVRICIDPRDQNRAIKREHFPMKTVEDVAVKLQGAKVFSTLDASSGFWTIELDEDSSMKTTFNNPFGRYKNR RMPFGISSAPEVFQKRISEIFDDMESCEAIMDDVLIWGETIEQHNKRLRIVLERVRAANLKLNKQKCKTSLTEVKYMGHI IGSDGLKTDPDKIDAITSMSEPNCKKELQRFMGMVNYLGKFVRNLSDINQPLRVLLEKYISWHWDERHANSFKALKKALT ESPVLQYYDQRKPVTLSVDASSQRLGACLL |
|