Gene
| Gene Model ID | pfu_aug1.0_8406.1_53175 |
|---|---|
| Locus | scaffold8406.1 : 1 ... 18917 : - |
| To GenomeBrowser | scaffold8406.1:1..18917 |
| Genes list of scaffold | scaffold8406.1 |
| Synonym | pfu_aug2.0_357.1_23925 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8406.1_53175.t1 | 2 | 1 | Ank_2 | 79 | 159 | 1.2e-15 | 57.6 | 6.5e-13 | 1.1e-09 | 38.5 |
| pfu_aug1.0_8406.1_53175.t1 | 2 | 1 | Ank_4 | 80 | 130 | 2.9e-11 | 43.5 | 3.5e-08 | 5.7e-05 | 23.4 |
| pfu_aug1.0_8406.1_53175.t1 | 3 | 1 | Ank_5 | 98 | 134 | 4.8e-08 | 33.0 | 7.9e-06 | 0.013 | 15.7 |
| pfu_aug1.0_8406.1_53175.t1 | 3 | 1 | Ank | 110 | 135 | 1.4e-10 | 40.4 | 1.2e-05 | 0.02 | 14.6 |
| pfu_aug1.0_8406.1_53175.t1 | 3 | 1 | Ank_3 | 110 | 134 | 1.8e-09 | 36.8 | 1.4e-06 | 0.0023 | 17.9 |
| pfu_aug1.0_8406.1_53175.t1 | 2 | 2 | Ank_4 | 139 | 200 | 2.9e-11 | 43.5 | 7.8e-06 | 0.013 | 16.0 |
| pfu_aug1.0_8406.1_53175.t1 | 3 | 2 | Ank | 139 | 158 | 1.4e-10 | 40.4 | 0.098 | 160.0 | 2.3 |
| pfu_aug1.0_8406.1_53175.t1 | 3 | 2 | Ank_3 | 139 | 158 | 1.8e-09 | 36.8 | 0.15 | 240.0 | 2.4 |
| pfu_aug1.0_8406.1_53175.t1 | 3 | 2 | Ank_5 | 139 | 162 | 4.8e-08 | 33.0 | 0.13 | 210.0 | 2.3 |
| pfu_aug1.0_8406.1_53175.t1 | 2 | 2 | Ank_2 | 140 | 206 | 1.2e-15 | 57.6 | 1.6e-09 | 2.7e-06 | 27.6 |
| pfu_aug1.0_8406.1_53175.t1 | 3 | 3 | Ank_5 | 178 | 204 | 4.8e-08 | 33.0 | 0.00029 | 0.48 | 10.7 |
| pfu_aug1.0_8406.1_53175.t1 | 3 | 3 | Ank | 181 | 203 | 1.4e-10 | 40.4 | 4.9e-07 | 0.00081 | 19.0 |
| pfu_aug1.0_8406.1_53175.t1 | 3 | 3 | Ank_3 | 182 | 203 | 1.8e-09 | 36.8 | 7.8e-05 | 0.13 | 12.5 |
| pfu_aug1.0_8406.1_53175.t1 | 1 | 1 | TRP_2 | 214 | 276 | 4.1e-30 | 103.5 | 6.4e-33 | 1.1e-29 | 102.1 |
| pfu_aug1.0_8406.1_53175.t1 | 1 | 1 | PKD_channel | 411 | 551 | 1.2e-08 | 33.8 | 1.1e-11 | 1.8e-08 | 33.2 |
| pfu_aug1.0_8406.1_53175.t1 | 1 | 1 | Ion_trans | 417 | 568 | 6.2e-25 | 87.6 | 3.8e-28 | 6.2e-25 | 87.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8406.1_53175.t1 | gi|2879809|emb|CAA11261.1| | trp-like protein [Loligo forbesi] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8406.1_53175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8406.1_53175.t1 gggtccttgtcggggtctgtcacccgatcagaggcggatccagattcggggacagactcggatacagacatcaacaggat ggacaaggtatattaccaatacagggagaagctgatgaaccagggtcggcttatggaggaccccggtattgacgtggagg ggggaggggacagcctggggatgggggtcataagaaaggaggtggaccttacgaacgacgaaaaacagtatctgttggcc gtggaaaggggggatgtaccttctacacggcagtacctcagcatgggggttcagaccggactcaatattaattgtgtgga ccccttggggcggactgccttactggtggctatagagaacgagaacatagaaatgatagaagtgctgttaagttataatg tggaattaggtgacgcccttctccatgctattacagaggagaacgtagaggctgtggagttattactgaaccatgaagtg gcaacgaaaggagaagcggctttacatcaatctgttccctccagttccttcacaccagacattacgcctattattctagc tgctcacagagacaattatgaaatcatcaagcttttgttggatcgaggctacaggataccgaaacctcatgacgtcaggt gtaattgtaaaaactgtaaaatcgtcagttctgacgacagtttacgtcactcacggtcacgcatcaacgcctaccgagct ctagccagtccgtcattaattgcactgtccagtaaagacccgattcttacctcatttgaactcagctgggaactcaaaag actcagtaaattggaaaacgaatttaaaattgactacgaaaagttagcgaaaaagtgtcaagaatttgcagtagacttgt tggatcaaatacgggggtccaaggagctagaaattattctgaatcatgactccagtaatcctaacgactatgctgaacag gagcctcaaacaggggataaaatgaggctctcaaggctcaaactggccatcaagttcaaacagaaaaagtttgttgctca cccgaactgccagcagctgctagcctcgttatggtatgaggggttgcccggattcagacgacataacatagtagctagac tgtcaatcaccgttattataggcattgtctttccacttctttccattttctatttgatcgctccaaagagtcgacccgga aaacttcttcgaaaaccatttatcaagtttatatgtcatagtgcagcttacattacattcctaggtctaatatggactga gatcaagcagttgtgggacgaaggagcccacgagtatgtacgtgatatgtggaatatattggactttgttactaattctc tgtacatagcaactttaactctcagggtcatagcatacttacaagtacaaaaagaaatagcagagaacaatcctaatgcg ttagctgagaggaaggattggaatccatacgaccctaaccttatagcggaggcactgtttgctgccgccaatatattcag ttcattaaagctcatttacatatttactgtgaacccccatttggggccccttcagatatctctaggacgtatgatattag atatcatgaagtttgctgtgttatatgtattagtgcttttttcattcgcgtgtggattaaaccatctatattggtactat gcaacgttacgagaggaggagtgtaaggtacagaataagctaccgtcctgtgaccggaagtacaaaagcttcgctaagtg a |
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Protein
| Protein ID | pfu_aug1.0_8406.1_53175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8406.1_53175.t1 GSLSGSVTRSEADPDSGTDSDTDINRMDKVYYQYREKLMNQGRLMEDPGIDVEGGGDSLGMGVIRKEVDLTNDEKQYLLA VERGDVPSTRQYLSMGVQTGLNINCVDPLGRTALLVAIENENIEMIEVLLSYNVELGDALLHAITEENVEAVELLLNHEV ATKGEAALHQSVPSSSFTPDITPIILAAHRDNYEIIKLLLDRGYRIPKPHDVRCNCKNCKIVSSDDSLRHSRSRINAYRA LASPSLIALSSKDPILTSFELSWELKRLSKLENEFKIDYEKLAKKCQEFAVDLLDQIRGSKELEIILNHDSSNPNDYAEQ EPQTGDKMRLSRLKLAIKFKQKKFVAHPNCQQLLASLWYEGLPGFRRHNIVARLSITVIIGIVFPLLSIFYLIAPKSRPG KLLRKPFIKFICHSAAYITFLGLIWTEIKQLWDEGAHEYVRDMWNILDFVTNSLYIATLTLRVIAYLQVQKEIAENNPNA LAERKDWNPYDPNLIAEALFAAANIFSSLKLIYIFTVNPHLGPLQISLGRMILDIMKFAVLYVLVLFSFACGLNHLYWYY ATLREEECKVQNKLPSCDRKYKSFAK |
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