Gene
| Gene Model ID | pfu_aug1.0_84300.1_63925 |
|---|---|
| Locus | scaffold84300.1 : 186 ... 2508 : + |
| To GenomeBrowser | scaffold84300.1:186..2508 |
| Genes list of scaffold | scaffold84300.1 |
| Synonym | pfu_aug2.0_1109.1_31441 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_84300.1_63925.t1 | 1 | 1 | CECR6_TMEM121 | 90 | 278 | 3.30006e-41 | 141.0 | 8.40779e-45 | 5.99994e-41 | 140.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_84300.1_63925.t1 | gi|156393641|ref|XP_001636436.1| | predicted protein [Nematostella vectensis] | 3.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_84300.1_63925.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_84300.1_63925.t1 atggcgaactgttttgtcagatgttgccgtaaggtgaaacacttacctacaggtttactcctctttctggtctttgtaat acaggcagcaactctgaactattacctttcccactacaagggcatggcctggttggcttttattggtgctgacgtaattg cattggcattctacgtcgttgcctttgttgtgtctgctcggataatgcgtcaccagaaaatgtggcagacgtcacaaacg aacatttcagaagctaatccggctggatttctagcatggttggtgttctctatagtactatcggttaaagctgccgttct ctttaaagatgtatcgtatctgctagacgaggacatgttcttcggcccgaacactctcaaaacggcccttgccttagccg gagtgttgttccttctgcttttgtcatctctacatgatgcaaagccaggcacagagagaaagcgttacatagaggaatta accgggactgttatatttgatattttagacggagttgacagtatggaaatattattcatcaaagaggacagagatgattt ccctcctggcttggaggacaccattattgccatagcttgtataaactttattttaccgacaatccctttgctcacattga acaggacaaaatatggacttgccaaaatgtctcagaaactggttatgattcataaaatctgccttgcctttgctgtgaat ctaccgttgctgataacgaggatgattctatggcatggacttaatcacggagtgtctatattttcgctgaaaaatattat cgtaatggcaatgatttcttatgatttctacgaacatcacgaagttgaagaagaaagagaagagagaggaaataaaggag aaggcaacgggaaggaaaatggaaaaacaaatgaagatgtgccggatatgtatgtgatggaggatagatttaattactcc tctacataa |
|
Protein
| Protein ID | pfu_aug1.0_84300.1_63925.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_84300.1_63925.t1 MANCFVRCCRKVKHLPTGLLLFLVFVIQAATLNYYLSHYKGMAWLAFIGADVIALAFYVVAFVVSARIMRHQKMWQTSQT NISEANPAGFLAWLVFSIVLSVKAAVLFKDVSYLLDEDMFFGPNTLKTALALAGVLFLLLLSSLHDAKPGTERKRYIEEL TGTVIFDILDGVDSMEILFIKEDRDDFPPGLEDTIIAIACINFILPTIPLLTLNRTKYGLAKMSQKLVMIHKICLAFAVN LPLLITRMILWHGLNHGVSIFSLKNIIVMAMISYDFYEHHEVEEEREERGNKGEGNGKENGKTNEDVPDMYVMEDRFNYS ST |
|