Gene
| Gene Model ID | pfu_aug1.0_84320.1_27850 |
|---|---|
| Locus | scaffold84320.1 : 378 ... 1735 : - |
| To GenomeBrowser | scaffold84320.1:378..1735 |
| Genes list of scaffold | scaffold84320.1 |
| Synonym | pfu_aug2.0_1305.1_18249 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_84320.1_27850.t1 | 1 | 1 | AMP_N | 37 | 143 | 1.3e-22 | 79.5 | 2.5e-26 | 1.9e-22 | 79.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_84320.1_27850.t1 | gi|241646767|ref|XP_002411120.1| | peptidase, putative [Ixodes scapularis] | 7.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_84320.1_27850.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_84320.1_27850.t1 atgcagttgttgcctgttcagaagaagtggaaagaagatttcaaagttatggacaagaaaatttggccagcctgcagcat ccacgcatccccacatactcatagagggggagcttccagagtctacatgtctgatatgattatgtacccgttcaggcaaa atactgagtttcattactttagtggatttttagaaagtgacagtgtattattgatactgagtaaacatactggggatgga ttaagggcagaatcagttctctttgtgcctaagcgtactccgaacaatgaaaattgggaagttcggaagtcaggtgcaga aggagctcatgaaataacgggtgtagaagaagcatataacatatgtgaattagacttgtttttagaacgatattgcacac agaaatctgacttcgttgtttggtgtgatcaggataaaatacctacgaacaaaacccttggccctgtggtcaaggatatg atgacacagaacaatgtaaaactagctcctatgtctataaatgttctaatgcatgcaattagagcgataaagtctccggc agaaattggtctgatgaagaaatctgtggagatagcttcggaggccatgacagagatcatcaaatcatcctatcctggag tatgtattctgaaacatttgaagtag |
|
Protein
| Protein ID | pfu_aug1.0_84320.1_27850.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_84320.1_27850.t1 MQLLPVQKKWKEDFKVMDKKIWPACSIHASPHTHRGGASRVYMSDMIMYPFRQNTEFHYFSGFLESDSVLLILSKHTGDG LRAESVLFVPKRTPNNENWEVRKSGAEGAHEITGVEEAYNICELDLFLERYCTQKSDFVVWCDQDKIPTNKTLGPVVKDM MTQNNVKLAPMSINVLMHAIRAIKSPAEIGLMKKSVEIASEAMTEIIKSSYPGVCILKHLK |
|