Gene
| Gene Model ID | pfu_aug1.0_8442.1_17305 |
|---|---|
| Locus | scaffold8442.1 : 28006 ... 29757 : + |
| To GenomeBrowser | scaffold8442.1:28006..29757 |
| Genes list of scaffold | scaffold8442.1 |
| Synonym | pfu_aug2.0_3091.1_05746 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8442.1_17305.t1 | 1 | 1 | Reo_sigmaC | 26 | 125 | 6.2e-07 | 28.8 | 3.5e-09 | 7.4e-07 | 28.6 |
| pfu_aug1.0_8442.1_17305.t1 | 2 | 1 | Laminin_II | 26 | 80 | 2.8e-06 | 27.1 | 0.00012 | 0.026 | 14.2 |
| pfu_aug1.0_8442.1_17305.t1 | 1 | 1 | MCPsignal | 34 | 128 | 2.2e-07 | 30.6 | 1.3e-09 | 2.9e-07 | 30.2 |
| pfu_aug1.0_8442.1_17305.t1 | 2 | 2 | Laminin_II | 75 | 131 | 2.8e-06 | 27.1 | 3.4e-06 | 0.00074 | 19.2 |
Transcript
| Transcript ID | pfu_aug1.0_8442.1_17305.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8442.1_17305.t1 atgatagatgaacttaaaaaccgcttgatggatcctgttgagcttagggaactcaggaacttgataatagaccaaaaaag gttcacagatctggaagcggatgtttcaaatttagcggatgatttgaatcaaacaagacatgaagtggcacagatatcca ccagtgttatcgaggcaactgagaaagtgacccagatatctgccagtgtgattgagacaactgagaaagtgacccagata tctgccagtgtgagtgagacaacggagaaagtcacccagatatctgccagtgtgagcgagacaacagagaaaatgactca gatatctgccagtgtgagcgagacaactgagaaagtgactcagataaaggatcaaactcagagggaactatcacaaatga agggtttgtataacaaacgatag |
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Protein
| Protein ID | pfu_aug1.0_8442.1_17305.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8442.1_17305.t1 MIDELKNRLMDPVELRELRNLIIDQKRFTDLEADVSNLADDLNQTRHEVAQISTSVIEATEKVTQISASVIETTEKVTQI SASVSETTEKVTQISASVSETTEKMTQISASVSETTEKVTQIKDQTQRELSQMKGLYNKR |
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