Gene
| Gene Model ID | pfu_aug1.0_8451.1_24399 |
|---|---|
| Locus | scaffold8451.1 : 55296 ... 89642 : + |
| To GenomeBrowser | scaffold8451.1:55296..89642 |
| Genes list of scaffold | scaffold8451.1 |
| Synonym | pfu_aug2.0_3261.1_05795 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8451.1_24399.t1 | 3 | 1 | DUF4457 | 364 | 404 | 0.0 | 226.1 | 5.0e-10 | 7.4e-06 | 25.1 |
| pfu_aug1.0_8451.1_24399.t1 | 3 | 2 | DUF4457 | 428 | 489 | 0.0 | 226.1 | 0.00011 | 1.6 | 7.6 |
| pfu_aug1.0_8451.1_24399.t1 | 3 | 3 | DUF4457 | 611 | 744 | 0.0 | 226.1 | 0.0 | 0.0 | 191.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8451.1_24399.t1 | gi|47226015|emb|CAG04389.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8451.1_24399.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8451.1_24399.t1 atggaaacaaatctgacaatgcaaggacaagctatgttgtgccaggttaaaatggagatgtcaaatgcccttgaagattc agacagtgatatagaaattgatgcctccaaacacaccaagaatcatccatcgaaggtcaagccaaaggctccacccccta gatcctcccaggaaactttctctgattctgatccagaaagtgaaggggaaaatgagaaattactccttagcttagcagat atcaaagatgaggagtctcgtgagcctccttcacctatagcagaggatgtcgaggaggacctggtacctgccatggatag cgtgtgtctgaacgacaataaaaatactccgaaaaagaaatcacccttcctcaaacccaccgatacagtggtgctagaac tggcagctcctcccacgaaaaatactccaaggaaaagtagcaatcggccattatcagccaacagagtttcacagaaagag aaactagactctgatgctgaggcgaacgctgtcatgagagctttacgggaagaaaacgagaaagcatctcgactgaaaca agaggccagtagtcacaaactacctcacacatcacaaaagcaagtcctcagtgatggaaaacccatggcctcaccaagga aatccatagatcctcccaagaaatcctctgatccttcaagatcatctctcgcctctcctcgatattcctcagagcagagg ccatcctcagcatcctctagtagaaacgtctctaaacatccatcatctagtgtggaaaaaagaccaccgtcgtcgtcatc atcgttgtctaaaaataagtcagctgaaccatcctccactgccaatgttaaccaaagttttctgtccgatgaacgactca ctgatgtgatgaagaaagtcatgctcatgcaacctaaacaacagaagaggttgtttaaaatgcttggcaatctagaggaa tcaacagaaagtggagataaatcagaaacagtgtccaggacacctccgtcaaaaccagtgaaagctacagtaccagtcaa agacatggtcagtccagtaacagagaataagccattatcattagaggacactgtagaggttaatatagaattgctatcca cctggggacataaagaattaataggtcttacagagttacagttctttgacgagaggtggcagctcataaaactcacttcc agcaatatttcagtacatgggtgcagagctcctagcagtaaccttgacgtcttgtttaatggtaaagcaaaggaattaga cataggtgttaaacatgccagaatattcgttggaggggaactgatatttgatggaaatatagaaaaaggctgcggaaatc aagtctttgactacggatttaatgtgtacgtaaaagacaatgacaaagtctctccaagagatgaggataaatctagtcca aaaagcctctcccctgtgattcacgtcagatctccaaggacggaaaaagttgtgactcaaaaacaaaacgtacgcagttc gtctccgtccactagaccttctaatggttcatcgcacacagctagtgagtcgactcgtgctaccgcaactcattcaacga aagtagataggcctcctatacgtagtgaaacaaggactatgaatcattcagaaaggaatttaccaaaaccggtggtgctg tcagacaggtctggctcagagacggaggaaggtcagagtaaaggtccatttgaaaatcccgtggacagtcaaccaagctc gaaaccagaggagactgcaactcctgcacgtccaagcagcggtaagcgtcccggcactgataaacggcaagttatctacc agctacagttgatttcgacatggggagatcagtactatgttggcctgaatggtctggaattcttcgatgccatgcataat aagatagagttaacagaaaataatatctcagcatatcctgatagtataaacgtactgtccaacatgcagaatgacgtgcg gacaccagacaagctgatagacaatgtaaatagtacgacagatggaaggcatatgtggctggcccctatacttccttcta tcttgaacagagtttatgtaatatttgatcagcccactgcagtgtccatgatcaagatatggaattacagtaaaacacca ggcaggggcgctaaagactttgctttactggttgacgacttactggtatataacggtatgctgtcgtccatcagacaggg ggctaagggtatattacccacagccgaagccccgcagtcctaccataccatcatatttactgacaacaaagatattatca agaaggaaaagcattctataatcagagctgagaccaaagacgagcgtgactggcatgatgaagaagagaaggtaaactcg agacaagacgaagcagattattacaacaagttccgtacaaagtttcatattcctggtgctacaaagaagatgattgttct aaatcagctggttagaaatctggtaaaaccgtttcgtcctgtgcttgtttatttcattgctgtacagtaa |
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Protein
| Protein ID | pfu_aug1.0_8451.1_24399.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8451.1_24399.t1 METNLTMQGQAMLCQVKMEMSNALEDSDSDIEIDASKHTKNHPSKVKPKAPPPRSSQETFSDSDPESEGENEKLLLSLAD IKDEESREPPSPIAEDVEEDLVPAMDSVCLNDNKNTPKKKSPFLKPTDTVVLELAAPPTKNTPRKSSNRPLSANRVSQKE KLDSDAEANAVMRALREENEKASRLKQEASSHKLPHTSQKQVLSDGKPMASPRKSIDPPKKSSDPSRSSLASPRYSSEQR PSSASSSRNVSKHPSSSVEKRPPSSSSSLSKNKSAEPSSTANVNQSFLSDERLTDVMKKVMLMQPKQQKRLFKMLGNLEE STESGDKSETVSRTPPSKPVKATVPVKDMVSPVTENKPLSLEDTVEVNIELLSTWGHKELIGLTELQFFDERWQLIKLTS SNISVHGCRAPSSNLDVLFNGKAKELDIGVKHARIFVGGELIFDGNIEKGCGNQVFDYGFNVYVKDNDKVSPRDEDKSSP KSLSPVIHVRSPRTEKVVTQKQNVRSSSPSTRPSNGSSHTASESTRATATHSTKVDRPPIRSETRTMNHSERNLPKPVVL SDRSGSETEEGQSKGPFENPVDSQPSSKPEETATPARPSSGKRPGTDKRQVIYQLQLISTWGDQYYVGLNGLEFFDAMHN KIELTENNISAYPDSINVLSNMQNDVRTPDKLIDNVNSTTDGRHMWLAPILPSILNRVYVIFDQPTAVSMIKIWNYSKTP GRGAKDFALLVDDLLVYNGMLSSIRQGAKGILPTAEAPQSYHTIIFTDNKDIIKKEKHSIIRAETKDERDWHDEEEKVNS RQDEADYYNKFRTKFHIPGATKKMIVLNQLVRNLVKPFRPVLVYFIAVQ |
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