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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8466.1_38762
Locus scaffold8466.1 : 796 ... 15330 : +
To GenomeBrowser scaffold8466.1:796..15330
Genes list of scaffold scaffold8466.1
Synonym pfu_aug2.0_2805.1_18924

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_8466.1_38762.t1 gi|29378331|gb|AAO83847.1|AF484090_1 synaptotagmin I [Lymnaea stagnalis] 2.0e-34

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
Dshape 1
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_8466.1_38762.t1
Definition-
>pfu_aug1.0_8466.1_38762.t1
atgtgtaaaagatgctgcaagaaacgcaagaagaaggacgtcaaaaaaggactcaaaaatgccgtcaatctgaaagacgt
agtctccataggctcgtcactcaaaaaggaaaaaatccaaccagatttagaagaacttgagggagcaatggaggataatg
aagacaatgaaagtacgaaatcagaggtcaaactcggaaaacttcagttccagctagactatgagtttcaaaaaggagag
aatgtcccatttgctgaaatcagtacaaagacattgacgtttgcggtatatgactttgatagattttcgaagcatgatca
aataggtcaagtacagattccacttaacactgtggatctatgtcaggttttagaagagtggcgggacctaaccagccccg
ataatgagtcagaaaaaagagttgattatgtcaaggtcatgttactggtatattataaaatcctgtctgtaacggaaatt
accgtgataaagtaa

Protein
Protein IDpfu_aug1.0_8466.1_38762.t1
Definition-
>pfu_aug1.0_8466.1_38762.t1
MCKRCCKKRKKKDVKKGLKNAVNLKDVVSIGSSLKKEKIQPDLEELEGAMEDNEDNESTKSEVKLGKLQFQLDYEFQKGE
NVPFAEISTKTLTFAVYDFDRFSKHDQIGQVQIPLNTVDLCQVLEEWRDLTSPDNESEKRVDYVKVMLLVYYKILSVTEI
TVIK

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