Gene
Gene Model ID | pfu_aug1.0_84716.1_71235 |
---|---|
Locus | scaffold84716.1 : 1 ... 2419 : - |
To GenomeBrowser | scaffold84716.1:1..2419 |
Genes list of scaffold | scaffold84716.1 |
Synonym | pfu_aug2.0_229.1_30471 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | BBS7like |
Description | Best hit to Nematostella vectensis predicted protein (NEMVEDRAFT_v1g103100) partial mRNA (BBS7?)BLAST hits to other organism's BBS7 genes. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_84716.1_71235.t1 | gi|156386122|ref|XP_001633762.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-Dshape | 1 |
>Adult tissues | |
Dshape | 1 |
maleGonad | 1 |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_84716.1_71235.t1 |
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Definition | - |
>pfu_aug1.0_84716.1_71235.t1 tggaagtaataagactggtaagaagggagaggcagtgttcagatctgataatatatctacgatatcgattctgaaggacg tgttaacaaaggaagctaccaagaaaaaaatcaggctcgatatcacatatgatattgcagaggagtccattccatacacg ttaaatttgatacatcccaagttagagtatcagctcttattggcaaagaaagtacagctcatagatgcactgaaggagct gtcagtccacgagagtgacaccagttttatgtcaggagagtacaaacaaatcctggaggaggcagacgatctgcaggcag agtataaacgacagccatgtcatctggagaggctatatggaatgatcacagatttgtacatcgacaagttcaagttcaaa ggtcaaaatgtcaagggcaaagtacctgccctattagaagtccttgacaactatgatctgcagacactagtgcaattctt tgaaacctcagcataa |
Protein
Protein ID | pfu_aug1.0_84716.1_71235.t1 |
---|---|
Definition | - |
>pfu_aug1.0_84716.1_71235.t1 GSNKTGKKGEAVFRSDNISTISILKDVLTKEATKKKIRLDITYDIAEESIPYTLNLIHPKLEYQLLLAKKVQLIDALKEL SVHESDTSFMSGEYKQILEEADDLQAEYKRQPCHLERLYGMITDLYIDKFKFKGQNVKGKVPALLEVLDNYDLQTLVQFF ETSA |