Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8480.1_45872
Locus scaffold8480.1 : 12014 ... 36586 : -
To GenomeBrowser scaffold8480.1:12014..36586
Genes list of scaffold scaffold8480.1
Synonym pfu_aug2.0_11.1_03390

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-Dshape 1
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_8480.1_45872.t1
Definition-
>pfu_aug1.0_8480.1_45872.t1
ctccgaaggacagattctgctgaggttatccgcgaattttggattattgatagacataatacattacctctactttcaga
agattcttatgcatggtgtcgggacaatctactctttcgtctcagcatcttgtccagtattgcacaaccatcaactgtga
cattggttaagaagtactcaaagacgggccctgtccaaacctctttagagacgacagggccccgaccacctgtcctctct
gaatgtcagtcggactcctcgggtgataatatagatgagctcgttacagccggcagagcacgtaacaactggggtgagtg
ttcggacggttatggtggcctgggctgtggagatcaaacagagtactataactgtgctgatatatctatcttgtcagctt
acgacagaccaaatcgtaaacaattgaggaagagaactacagctaaacctatcacggtcataccagaaatatcacaacca
aaacccaccgctcctatgacttctaggttgcagacggacttcatacctagagttgtacctgaaagaccgatggtggatat
cccaaaacaagaagttaagtacacaatctcacaagtagcgaaaccagactttaaggaggctgggggaatagttataagac
ctgagaaaatgttaaggaaatatcgaaaaatcnagaatcttactcctcctcctcctcctcccaaggggttaagcattcga
aatccttggaaatatccacaatcagataataatctagccattgtcacagaatccagaaacgaaaacataatgccggtaac
tatgtctccccagcgagtcactacgcctgcgcgagctttacccccaccaacgttacctccgccgagtttggacgtgaagg
aacaagtccatttgatgggaaatgcagttcagcaagaaaacaaccttctgaatagaaacagaatgatggatccgcagatc
ttggaggcgaataataatataaactcacaattaaatgcaaatcctacagagaaaccgtggccatatatggacagtttcat
aacaacgccatcaacgaaaaatgattggtcaatgcaaaacacgtggttgcctttccttgcaatggagatcgccgacggcg
tcatgccagcaaacaaggtggcgacatctatcaatagcaagcaatttgacgtcacggatgttcgtcagcgcgggggctca
atatctagcattacagggattgacaattccaaaaggatcaagggagtgaagcatttcgatgaaatcattgatccagatac
tgttacgccaccacctaaccttaacaaagcaccaagaccaaaccccgccacacgtgcaccaatgaagagagctaccaagg
tgctccctgggcgtgatgtcaacatggtcatgtccaaaacatatacaaatagttctccccaacgatccttcacaaccaag
gcaaccacacaacctccacaaccaaaaactcaagctccatcagcagtggctctgtctcagaatgaggcggtcttatctca
gaatgaggctccgtcacttcaacagaaagattctttcataagagacattgtgctagactcctccgcgatacagaagcagg
agggtcaagcgtcatttcagaacttgccccagagtgggcgtttaaacctatttcctagagacatgccaatggggaagtca
gacagtagtatgagcagtctgtcccaattaactgtaatatcagtgtag

Protein
Protein IDpfu_aug1.0_8480.1_45872.t1
Definition-
>pfu_aug1.0_8480.1_45872.t1
LRRTDSAEVIREFWIIDRHNTLPLLSEDSYAWCRDNLLFRLSILSSIAQPSTVTLVKKYSKTGPVQTSLETTGPRPPVLS
ECQSDSSGDNIDELVTAGRARNNWGECSDGYGGLGCGDQTEYYNCADISILSAYDRPNRKQLRKRTTAKPITVIPEISQP
KPTAPMTSRLQTDFIPRVVPERPMVDIPKQEVKYTISQVAKPDFKEAGGIVIRPEKMLRKYRKIXNLTPPPPPPKGLSIR
NPWKYPQSDNNLAIVTESRNENIMPVTMSPQRVTTPARALPPPTLPPPSLDVKEQVHLMGNAVQQENNLLNRNRMMDPQI
LEANNNINSQLNANPTEKPWPYMDSFITTPSTKNDWSMQNTWLPFLAMEIADGVMPANKVATSINSKQFDVTDVRQRGGS
ISSITGIDNSKRIKGVKHFDEIIDPDTVTPPPNLNKAPRPNPATRAPMKRATKVLPGRDVNMVMSKTYTNSSPQRSFTTK
ATTQPPQPKTQAPSAVALSQNEAVLSQNEAPSLQQKDSFIRDIVLDSSAIQKQEGQASFQNLPQSGRLNLFPRDMPMGKS
DSSMSSLSQLTVISV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495