Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_85159.1_63947
Locus scaffold85159.1 : 1 ... 1569 : +
To GenomeBrowser scaffold85159.1:1..1569
Genes list of scaffold scaffold85159.1
Synonym pfu_aug2.0_1302.1_08304

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_85159.1_63947.t1 1 1 URO-D 2 46 6.5e-10 38.4 9.2e-14 6.8e-10 38.3

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
trochophore 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_85159.1_63947.t1
Definition-
>pfu_aug1.0_85159.1_63947.t1
agtgaattgaagcatgcggtaaaggagatgttagagaagtttggtacaaatcggtatatagctaacctcggacacggtgt
aaataaagacgtagatcctgaacgtgttaaaacatttgtaaatgctgttcacatgtattcagaggatataaatgctttga
aataa

Protein
Protein IDpfu_aug1.0_85159.1_63947.t1
Definition-
>pfu_aug1.0_85159.1_63947.t1
SELKHAVKEMLEKFGTNRYIANLGHGVNKDVDPERVKTFVNAVHMYSEDINALK

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