Gene
| Gene Model ID | pfu_aug1.0_85334.1_13344 |
|---|---|
| Locus | scaffold85334.1 : 1 ... 2305 : + |
| To GenomeBrowser | scaffold85334.1:1..2305 |
| Genes list of scaffold | scaffold85334.1 |
| Synonym | pfu_aug2.0_90.1_00215 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_85334.1_13344.t1 | 2 | 1 | PTR2 | 1 | 126 | 2.8e-19 | 69.1 | 1.4e-21 | 2.9e-18 | 65.8 |
| pfu_aug1.0_85334.1_13344.t1 | 2 | 2 | PTR2 | 167 | 206 | 2.8e-19 | 69.1 | 0.015 | 32.0 | 3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_85334.1_13344.t1 | gi|291239067|ref|XP_002739447.1| | PREDICTED: solute carrier family 15 member 4-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_85334.1_13344.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_85334.1_13344.t1 tgtgtttaatacaatcatcatcttgattttgatacccatagtagatcgcataattctaccccttatggccaagtttggtc gcagtccaacccatctacagagaattggttttggtttcatactagcctccctttctgtctttgtggctggaattgtggag atataccgaaagcaggaattgtctacatccggtggaatgacacaagaattggcgggagacaaatttaatgcatcaactat gtctatgttcgtacaagtgccagaattcgcccttgttggagctagtgaagttttcgccagtatttctggattggagtttg cttactcacaagcaccagagtttttacacggtcgttgtatgggattgtttcttgtggcgtctggacttggtaactacgtg tcagacgccattttgagaattgttacgttagccaccggatccgaaccaccgaattcttggttccccgatgacatcaacaa agggaagacagagtacttgtttttcttattaggagggctgatggtactagatttcatagtgtttgtgtttgtggcacgta gttataaatacagaaagcaaacaacagaacaggaaaaagcacctatagaggcaaagaaagttgtcactgccaatgacatg cctcctccgtatgaaaccgtcaacccggcattttcaccagatgccttagtgaccaaactgtaa |
|
Protein
| Protein ID | pfu_aug1.0_85334.1_13344.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_85334.1_13344.t1 VFNTIIILILIPIVDRIILPLMAKFGRSPTHLQRIGFGFILASLSVFVAGIVEIYRKQELSTSGGMTQELAGDKFNASTM SMFVQVPEFALVGASEVFASISGLEFAYSQAPEFLHGRCMGLFLVASGLGNYVSDAILRIVTLATGSEPPNSWFPDDINK GKTEYLFFLLGGLMVLDFIVFVFVARSYKYRKQTTEQEKAPIEAKKVVTANDMPPPYETVNPAFSPDALVTKL |
|