Gene
| Gene Model ID | pfu_aug1.0_8535.1_67891 |
|---|---|
| Locus | scaffold8535.1 : 5386 ... 31369 : + |
| To GenomeBrowser | scaffold8535.1:5386..31369 |
| Genes list of scaffold | scaffold8535.1 |
| Synonym | pfu_aug2.0_202.1_07143 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8535.1_67891.t1 | 1 | 1 | 7TM_GPCR_Srsx | 55 | 334 | 4.2e-18 | 65.4 | 1.9e-21 | 5.6e-18 | 65.0 |
| pfu_aug1.0_8535.1_67891.t1 | 1 | 1 | 7tm_1 | 60 | 319 | 0.0 | 220.2 | 0.0 | 0.0 | 219.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8535.1_67891.t1 | gi|1857635|gb|AAD11810.1| | lymnokinin receptor [Lymnaea stagnalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_8535.1_67891.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8535.1_67891.t1 atggatgactatacatacaccagtggttactatgatggtaactggtcatataacagtacatactatgataatctgtacct agatgatgaccatgaggacggtctgtactatgtaccaccaggcatcatcgttttactcgcattcctatacggctctatct cacttattgccgtttttggcaacggattagtcatactggtcattgccaaaaacaagaaaatgcaaacagtaaccaacatc ctgatcgcaaatctagcgttggctgacgtcatcatagggatattctctattcctttccaattccaagcggcacttcttca gaaatgggtagtggccaactttatgtgttcaatggcgccgttcgttaaaaacgtttccgtaaacgtcagtgtttttacgt taaccgtgatatccatagaccgttacattgccgttatttacccacttaaggcaggatttaaggaaggggtggctgctgtc gtcctggcttttgtgtggttgatcagtattgcgtccagcattccagatgccctttatttgtatgtcacaatgattccaga gaagtcaggcggtatgaaggcattttgctcaccccactggccctcgccagagtttggaaaatactatcatttatacctac ttctagtacaatacctggtgcccttaataattataaacttttcctatttccgaattgttcatcgtatctggggaaataag gcacctgggcacgggatggacaggagggacaacataagagcaaggaacaggaaaaaggtggttaagatgctgatcatcgt agtatgcctgtttgttttatgctggttaccgttccatgtctacaactttctatctgagctgtacccggacattaatttgt acaaatacatcaacatcatatggttttgtttcaattggttggcgatgtccaactcttgttataaccctttcatttatggc ttgcttaacgaaaaatttaagagagaatatagacggttatttagactttgccatgacaggaaacggaagtaccaggatcc tgatttggcagactattcagacgacagtgcctcgccttcacagagaggaagtcttcttctaaacggaaaggaaatgattc attcaaacggacgtgtagtcagtttccgaataaagaaatatcccgcggacagaggaaccggaagttcatatgtgtag |
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Protein
| Protein ID | pfu_aug1.0_8535.1_67891.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8535.1_67891.t1 MDDYTYTSGYYDGNWSYNSTYYDNLYLDDDHEDGLYYVPPGIIVLLAFLYGSISLIAVFGNGLVILVIAKNKKMQTVTNI LIANLALADVIIGIFSIPFQFQAALLQKWVVANFMCSMAPFVKNVSVNVSVFTLTVISIDRYIAVIYPLKAGFKEGVAAV VLAFVWLISIASSIPDALYLYVTMIPEKSGGMKAFCSPHWPSPEFGKYYHLYLLLVQYLVPLIIINFSYFRIVHRIWGNK APGHGMDRRDNIRARNRKKVVKMLIIVVCLFVLCWLPFHVYNFLSELYPDINLYKYINIIWFCFNWLAMSNSCYNPFIYG LLNEKFKREYRRLFRLCHDRKRKYQDPDLADYSDDSASPSQRGSLLLNGKEMIHSNGRVVSFRIKKYPADRGTGSSYV |
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