Gene
| Gene Model ID | pfu_aug1.0_8542.1_45883 |
|---|---|
| Locus | scaffold8542.1 : 486 ... 4280 : + |
| To GenomeBrowser | scaffold8542.1:486..4280 |
| Genes list of scaffold | scaffold8542.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8542.1_45883.t1 | 1 | 1 | Neur_chan_memb | 18 | 296 | 2.90069e-43 | 148.4 | 0.0 | 3.9937e-43 | 148.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8542.1_45883.t1 | gi|312075136|ref|XP_003140283.1| | hypothetical protein LOAG_04698 [Loa loa] | 2.0e-40 |
Transcript
| Transcript ID | pfu_aug1.0_8542.1_45883.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8542.1_45883.t1 atgacgtatgttttccacatccgccggaagacgttctactacatctttaatatcattgttccatgtgtgatgctttcagt tttgactttattgacgttttggttgccgcctacctctggcgagaaaatcactctgggtctatctgtgtttctagcatttt caatgtttatgttgctgatagcagaggaagtccctgcgacgtcagaagctgttcctttgataggaatatatttgtgtgtc gtcatgacgatgacgtcattgtccgtcattatggctgtcatggtgattaacctgtataacagaggactgaaaacgaggcg ggcacctgcttggctacgggcgataactctacgttggatttcaaaacctctccttatgaaacacgacattgaaaaagtag caaacactatctctctggaagatgaaaaagaaggtgcctatcgatgtaaaaagcatgacaaaaaacagaaattaaacaat cttcatgaagtcaacactaatgacgaatacagacctactgtccgtaatagacgttttacaaacaattcaatagacaaacc aatcaaaactaacgattcagaagaggaggaagttatttggctacgaagagaggattttgtaccagagacaagtgaaatcg atgccgatgttaccatggcatctaataattttaatttaaaagaatctcaaaataataataaagttaaacaaacttgcact cattccgaaaatcgtgattccaaaacgtgtgcagagcaaatagagaaggaaatttctgaagtttgtaaaactcaaataaa tcttaaaaataggaaattgatagtagccgagtggcagaggatagccgctgtagtagatagaatattgttctggttttatt tccttggtactctggcctcgtacattctgatactagtggtggtaccagacgaacaatatgaaatgtggaacaaagaaatt agggaatatagaatcaacaagcaagatccatacgtaagttag |
|
Protein
| Protein ID | pfu_aug1.0_8542.1_45883.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8542.1_45883.t1 MTYVFHIRRKTFYYIFNIIVPCVMLSVLTLLTFWLPPTSGEKITLGLSVFLAFSMFMLLIAEEVPATSEAVPLIGIYLCV VMTMTSLSVIMAVMVINLYNRGLKTRRAPAWLRAITLRWISKPLLMKHDIEKVANTISLEDEKEGAYRCKKHDKKQKLNN LHEVNTNDEYRPTVRNRRFTNNSIDKPIKTNDSEEEEVIWLRREDFVPETSEIDADVTMASNNFNLKESQNNNKVKQTCT HSENRDSKTCAEQIEKEISEVCKTQINLKNRKLIVAEWQRIAAVVDRILFWFYFLGTLASYILILVVVPDEQYEMWNKEI REYRINKQDPYVS |
|