Gene
| Gene Model ID | pfu_aug1.0_85501.1_63960 |
|---|---|
| Locus | scaffold85501.1 : 428 ... 2215 : - |
| To GenomeBrowser | scaffold85501.1:428..2215 |
| Genes list of scaffold | scaffold85501.1 |
| Synonym | pfu_aug2.0_711.1_04513 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_85501.1_63960.t1 | 1 | 1 | tRNA-synt_2b | 167 | 341 | 1.4e-28 | 99.6 | 3.1e-32 | 2.3e-28 | 98.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_85501.1_63960.t1 | gi|270001083|gb|EEZ97530.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_85501.1_63960.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_85501.1_63960.t1 atggaacatatactatgtagaggaaataaggtctcttatttgcgactccagcgatatactgtgtcttacaaaagatggga agatcaggggaagttggaaattccacccccggagtttgattgggactacctttgtgatgagagtaaaatggaggaaataa aagataacataatgcatagaaaaagggtcggtgatattgataaagtcaaggaaatatggaagttgtggaaaaatgagaac gatgatgaacggaagtcaaaattattaatagttctcaatactgctgcagcagctattccgaataagagtaaccctaattc accaatcagtgaagaggaccaggctgtaaccatggagacagttggaagagagagagaatttgactttaaacccagaagtg ttattgatatatgtgaaaaattaggattactacaaacacaaaatttatcgcatacctgtagtcatagggcatattatttc cttggagacctcgctagacttgaacatgctttaatacagttcacattggatcgagtaagaacgaatggatttttgcttat atcggtgccagatattataaatcctggaatcatagaagcctgtggatttccaacatcaggtaaaaagacgcaagtgtata gtctggatttaggtaaccgtggcaacgatcgtctgtgcctggccggaacctctgaaatgcctattgccgggttttttatg aatcaaatcctgcaggggcaacatttaccgcagaaagtatgtgccgtcagcagatgctatagagccgaaacctctgatgc tgtacaagagcggggaatttatagagtgcacgagtttacgaaggtcgaaatgtttgccgttacaaggccagctcagagtg atgaaatgttgcaaaacatcatcggtatagagagggatttattctcagagctggggttatacttcaaagttctagacatg cctactcaagaattaggggcacctgcctatcaaaaatacgacattgagacttggatgcctgcattaaagttttggggaga gatttccagtgcgtcaaattgtacagattatcaaagccgacgtctgaatatcaaatatatgacagacaagggagacaacc ttagccatgttcataccattaacggcacagcgtgtgctattcccaggcttataatggcaatcgttgaaaattaccaacag aatgacgggagtgttgaaatacctaaagctttacagccatatatgaacggaaaaaggaaacttgaaggatgtgacctgga aaagagacggaggttcttatcaaaacctatagaactccacggaaaagtgtattag |
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Protein
| Protein ID | pfu_aug1.0_85501.1_63960.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_85501.1_63960.t1 MEHILCRGNKVSYLRLQRYTVSYKRWEDQGKLEIPPPEFDWDYLCDESKMEEIKDNIMHRKRVGDIDKVKEIWKLWKNEN DDERKSKLLIVLNTAAAAIPNKSNPNSPISEEDQAVTMETVGREREFDFKPRSVIDICEKLGLLQTQNLSHTCSHRAYYF LGDLARLEHALIQFTLDRVRTNGFLLISVPDIINPGIIEACGFPTSGKKTQVYSLDLGNRGNDRLCLAGTSEMPIAGFFM NQILQGQHLPQKVCAVSRCYRAETSDAVQERGIYRVHEFTKVEMFAVTRPAQSDEMLQNIIGIERDLFSELGLYFKVLDM PTQELGAPAYQKYDIETWMPALKFWGEISSASNCTDYQSRRLNIKYMTDKGDNLSHVHTINGTACAIPRLIMAIVENYQQ NDGSVEIPKALQPYMNGKRKLEGCDLEKRRRFLSKPIELHGKVY |
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