Gene
| Gene Model ID | pfu_aug1.0_8568.1_17327 |
|---|---|
| Locus | scaffold8568.1 : 8746 ... 24855 : + |
| To GenomeBrowser | scaffold8568.1:8746..24855 |
| Genes list of scaffold | scaffold8568.1 |
| Synonym | pfu_aug2.0_8670.1_02983 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8568.1_17327.t1 | 1 | 1 | Laminin_G_2 | 129 | 257 | 1.0e-14 | 54.6 | 1.0e-17 | 1.9e-14 | 53.8 |
| pfu_aug1.0_8568.1_17327.t1 | 1 | 1 | Laminin_G_1 | 129 | 257 | 3.0e-06 | 27.2 | 3.9e-09 | 7.3e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8568.1_17327.t1 | gi|353228553|emb|CCD74724.1| | septate junction protein [Schistosoma mansoni] | 3.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_8568.1_17327.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8568.1_17327.t1 atgtatgctgcaaatacgagtgggacagccaacagtatagatggcagaaagatggtccatcgcagtgccaataggcgttt gatgattggtgcgctcatcgtcctcttcttggctgtgattgctgcaatagccggggttgttatcttcttagcaaattcta caaaactggcctcgacatcaacccaagtaatacaaacaacaaaaacaatgaccacaacacaaactactccaacaacaagg actacagaaacaatgagattaactactactacagcagaaagagtgcaaggaattaatattccagatcacaacgttatgat aagatacacactagatcaaaatcaaggaatatatttctccgattttatgaacattagtgttcggttcagcacattatata accagggtttcctattctggataaatgatgaagctacctcagattacgtgtcaatggatataaacgatttcggtcgtgtg aggtttactgcaaaagcgagatatgagagggttgaagtaaattctgcaaatgttggatattcatacacagatggcaaaga acatacagttcggatgtggagaacaggaagtgatgcaaacgaactgcatttacaggttgacaacgaccaagaagcacttt taagtatgacacaaccatcaattctcagcaatgatcccatacttacgaagcctaaatttatgtatctaggtaaaaatgaa acaacccagaatggatttaagggctgtatatctcacattgagatagatggtgtcaatcctttagtagaaatatatagagt tccccgtccctcattcattgatgccacaccaaacaatacaattcttcgaaatgacgtttgtggatatgatgacatcactg tagatgttagtgattcagtatgtcaaaatgaatccctgttagtacagtttgctcttccttgcctggccacaaatcttgga agtgtcttggcagcccaaaaccaaaccatattttgcagtgttttagagaatatagcagactgtatcgtggatagaatata ccttgccacgtccgtacaatgtacagatgacgataaatatgatgctgtgagaaaattcgaaagtcaactcaatatagtgt ttgcaacatatggaataacataccaaatacagccatgcttaccgccatga |
|
Protein
| Protein ID | pfu_aug1.0_8568.1_17327.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8568.1_17327.t1 MYAANTSGTANSIDGRKMVHRSANRRLMIGALIVLFLAVIAAIAGVVIFLANSTKLASTSTQVIQTTKTMTTTQTTPTTR TTETMRLTTTTAERVQGINIPDHNVMIRYTLDQNQGIYFSDFMNISVRFSTLYNQGFLFWINDEATSDYVSMDINDFGRV RFTAKARYERVEVNSANVGYSYTDGKEHTVRMWRTGSDANELHLQVDNDQEALLSMTQPSILSNDPILTKPKFMYLGKNE TTQNGFKGCISHIEIDGVNPLVEIYRVPRPSFIDATPNNTILRNDVCGYDDITVDVSDSVCQNESLLVQFALPCLATNLG SVLAAQNQTIFCSVLENIADCIVDRIYLATSVQCTDDDKYDAVRKFESQLNIVFATYGITYQIQPCLPP |
|