Gene
| Gene Model ID | pfu_aug1.0_857.1_00520 |
|---|---|
| Locus | scaffold857.1 : 1 ... 15676 : + |
| To GenomeBrowser | scaffold857.1:1..15676 |
| Genes list of scaffold | scaffold857.1 |
| Synonym | pfu_aug2.0_1950.1_01916 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_857.1_00520.t1 | 2 | 1 | Adaptin_N | 3 | 96 | 1.2e-26 | 93.2 | 1.3e-22 | 1.7e-19 | 69.5 |
| pfu_aug1.0_857.1_00520.t1 | 2 | 2 | Adaptin_N | 96 | 227 | 1.2e-26 | 93.2 | 1.0e-09 | 1.4e-06 | 26.9 |
| pfu_aug1.0_857.1_00520.t1 | 1 | 1 | CENP-B_N | 240 | 291 | 9.5e-10 | 37.7 | 1.9e-12 | 2.6e-09 | 36.3 |
| pfu_aug1.0_857.1_00520.t1 | 1 | 1 | HTH_Tnp_Tc5 | 309 | 372 | 2.4e-15 | 56.0 | 3.8e-18 | 5.1e-15 | 55.0 |
| pfu_aug1.0_857.1_00520.t1 | 2 | 1 | DDE_1 | 402 | 475 | 6.72623e-44 | 149.6 | 1.3e-22 | 1.7e-19 | 69.8 |
| pfu_aug1.0_857.1_00520.t1 | 2 | 2 | DDE_1 | 473 | 572 | 6.72623e-44 | 149.6 | 9.5e-26 | 1.3e-22 | 80.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_857.1_00520.t1 | gi|291241400|ref|XP_002740600.1| | PREDICTED: tigger transposable element-derived protein 6-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_857.1_00520.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_857.1_00520.t1 aaaatatgcttccttacaggtggagtgccttcagctgatagggtgtgctcagaatttctcagacaaacgagtaggatatc tggcggccatgttgattttggatgaaactcaggacgtgcatttacttctcatctgctctatcatgtatgatctctgtaat gggactcagtacatccagggtctggctctgtgtaccatggcatctataaactcagctatatggttccaatacttgtccac ggaagtttctaagatgatcaaatcttcagatgtctatatcaagaaaaaggtaaaaattttgaagttgctacgagtgctgg gtaaaaacaacacggacagcagccaaattatgaatgatattttagcacaggttgccatgaacacagacaccagtcagaat gtgggtcgtgccgtactgtacgagactgtacgaacaatactaggaattaaatcagaggcaggtctaagggtttctgagga tgaggtagtggacgtgttagagaaagtcctgtccatgaattactgtgaagatttcaccaaagagtacgctatgaacgctc taatgaaactaagctctcggtttaggacctccataggtcgaagtccagcgtcggtccggattttttcccttcatattcat accatttttacttcggataactcgaaattggttatctcaaaattccgcttatctcgaacgcagaagaagggtacgaagag aaagctggatctaaagacttatgagacaaagtacgatgccatcatggaggttgagagggggtccttgtcgaagaaacagg tcgctgaaaagtttgccatatccgcttcaacgctctcaacatggcttaaaaacgctgactctattaaagagaaggttacg tctggtaatgttgagcctcaacgcaaagagaacagagcagccaagtttcctgaagtcgaggacgcactcttaaaatggtt tgcaaatgccagaacccataatgtgacagtctcaggggagatgatgcgagagaaggccagagacttcgcactcaaactgg gagttccagactcagagttcgaatgttccgttggttggctagagcgatttaaagccaggcacgtcatagtttttaaaagg gtatgtggcgaatcgaatgacgttgcgacagattcggtagcattgtcagactggaaaagtaagcttgccactatccttaa agactactccgcatcagacgttttcaacgctgacgagacaggcatattctataaacttatgccagacaaaacgctagaat tcaagtctgtcagttgccatggtggtaaacaaagcaaagagcaccttacagtaatggtggctgccaatatgtccggcaca gagaagcttcccttaatggtcatcggcaagtctgcgaatcccagatgcttcaagaatatgtcaaagcagaaacgtaaaat ctgcttggttatcgacaactgccccgcgcatcctcacattaaaagtctgaaagctacgaccatagtattcctgccaccca acacaaccagcgttactcaaccaatggaccagggcatcatccgcaaccttaaagttttctacaggaagttcatggtacaa cggaagctgagagccatagacaccaactccgacttcaccctgacggtactggacgcactcaggatgctacaccaagcctg gcgttctgtgacgatgaagaccatagccaactgttacagacacgcaggatttgccgtaactgactccgaccaggtcgccg agtccaacgatgatgatgacgacgacgacccagacaatgatttaccactggcaagtctcatgaacgtccctccaggcgtc tcaatgagtgactttgtagctgcagacgatgatgtaccaactacgaatgaaaatataagtaatgactgtcttactttggg tgttcatggtagtataattctggttggacaggtgcaaattttccgagaatcatggaatttgcacgtgaccaaccagaatt atactaccatgaacacccaaagtataacagtcatttcttaa |
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Protein
| Protein ID | pfu_aug1.0_857.1_00520.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_857.1_00520.t1 KYASLQVECLQLIGCAQNFSDKRVGYLAAMLILDETQDVHLLLICSIMYDLCNGTQYIQGLALCTMASINSAIWFQYLST EVSKMIKSSDVYIKKKVKILKLLRVLGKNNTDSSQIMNDILAQVAMNTDTSQNVGRAVLYETVRTILGIKSEAGLRVSED EVVDVLEKVLSMNYCEDFTKEYAMNALMKLSSRFRTSIGRSPASVRIFSLHIHTIFTSDNSKLVISKFRLSRTQKKGTKR KLDLKTYETKYDAIMEVERGSLSKKQVAEKFAISASTLSTWLKNADSIKEKVTSGNVEPQRKENRAAKFPEVEDALLKWF ANARTHNVTVSGEMMREKARDFALKLGVPDSEFECSVGWLERFKARHVIVFKRVCGESNDVATDSVALSDWKSKLATILK DYSASDVFNADETGIFYKLMPDKTLEFKSVSCHGGKQSKEHLTVMVAANMSGTEKLPLMVIGKSANPRCFKNMSKQKRKI CLVIDNCPAHPHIKSLKATTIVFLPPNTTSVTQPMDQGIIRNLKVFYRKFMVQRKLRAIDTNSDFTLTVLDALRMLHQAW RSVTMKTIANCYRHAGFAVTDSDQVAESNDDDDDDDPDNDLPLASLMNVPPGVSMSDFVAADDDVPTTNENISNDCLTLG VHGSIILVGQVQIFRESWNLHVTNQNYTTMNTQSITVIS |
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