Gene
| Gene Model ID | pfu_aug1.0_857.1_00521 |
|---|---|
| Locus | scaffold857.1 : 16676 ... 25005 : - |
| To GenomeBrowser | scaffold857.1:16676..25005 |
| Genes list of scaffold | scaffold857.1 |
| Synonym | pfu_aug2.0_12.1_06737 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_857.1_00521.t1 | 7 | 1 | zf-C2H2_4 | 41 | 60 | 3.7e-09 | 36.2 | 8.1e-05 | 0.24 | 11.8 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 1 | zf-H2C2_2 | 41 | 50 | 2.0e-06 | 27.8 | 0.4 | 1200.0 | 0.1 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 1 | zf-C2H2 | 42 | 63 | 6.6e-17 | 60.7 | 4.2e-05 | 0.12 | 12.7 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 2 | zf-C2H2 | 500 | 522 | 6.6e-17 | 60.7 | 6.6e-08 | 0.00019 | 21.5 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 2 | zf-C2H2_4 | 500 | 522 | 3.7e-09 | 36.2 | 2.1e-06 | 0.0061 | 16.8 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 2 | zf-H2C2_2 | 500 | 510 | 2.0e-06 | 27.8 | 0.0025 | 7.4 | 7.0 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 3 | zf-H2C2_2 | 515 | 539 | 2.0e-06 | 27.8 | 6.6e-07 | 0.002 | 18.3 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 3 | zf-C2H2 | 528 | 550 | 6.6e-17 | 60.7 | 1.9e-07 | 0.00057 | 20.0 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 3 | zf-C2H2_4 | 528 | 550 | 3.7e-09 | 36.2 | 0.00019 | 0.56 | 10.6 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 4 | zf-H2C2_2 | 543 | 564 | 2.0e-06 | 27.8 | 9.6e-05 | 0.29 | 11.5 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 4 | zf-C2H2 | 555 | 577 | 6.6e-17 | 60.7 | 0.051 | 150.0 | 3.0 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 4 | zf-C2H2_4 | 555 | 577 | 3.7e-09 | 36.2 | 0.051 | 150.0 | 3.0 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 5 | zf-C2H2 | 583 | 604 | 6.6e-17 | 60.7 | 3.2e-07 | 0.00094 | 19.3 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 5 | zf-C2H2_4 | 583 | 604 | 3.7e-09 | 36.2 | 0.00032 | 0.95 | 9.9 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 5 | zf-H2C2_2 | 584 | 592 | 2.0e-06 | 27.8 | 0.22 | 660.0 | 0.9 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 6 | zf-H2C2_2 | 597 | 618 | 2.0e-06 | 27.8 | 0.00029 | 0.87 | 10.0 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 6 | zf-C2H2 | 610 | 634 | 6.6e-17 | 60.7 | 0.0039 | 12.0 | 6.5 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 6 | zf-C2H2_4 | 610 | 634 | 3.7e-09 | 36.2 | 0.002 | 5.9 | 7.4 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 7 | zf-H2C2_2 | 630 | 652 | 2.0e-06 | 27.8 | 2.8e-06 | 0.0082 | 16.3 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 7 | zf-C2H2 | 641 | 664 | 6.6e-17 | 60.7 | 1.7e-06 | 0.0051 | 17.0 |
| pfu_aug1.0_857.1_00521.t1 | 7 | 7 | zf-C2H2_4 | 641 | 664 | 3.7e-09 | 36.2 | 8.9e-06 | 0.026 | 14.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_857.1_00521.t1 | gi|291234450|ref|XP_002737161.1| | PREDICTED: putative zinc finger protein 724-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_857.1_00521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_857.1_00521.t1 atggataactctacaaatacacagtctctaacatccttcaagataaaggatgcaaagaaacaagaccctagtcgaaatct atttgaaaccgcaaaagatgccggaccttcagctggtatcgcctgtgagttatgtggtacaggattcactcgcagaaaga ctttattggatcactatcgtcatagacacggggtcatagctaactctgggcacagcaagaagaaggatcacaagaaaaat aaacttcccaaaaaactattagatgatccaccagagagaatatcgacacgaagtgtggggaggaaaagaaagcaggagac ttatgcaggttctgagggaaatggtcatgatgtaaatacatgtaaaaagaagaaagaaatcagacttgaacaaaatgcac gtcaaagtgaagtcactgtaccttcatcaagtaatggtgaggcaaaaaaatatgcaagcccaaaagaaaacagttgtaca gttagtaacggtgctgttagtataggtgtggaaggtgctattggtgacagtgaaggtgtgacagatgatgttagtggagg caccacaggaattataggtggttgtgatattgctgttagtgtagatgctacaggtattggtagtggagatactattagtg ttagtcatggtgcaattagtacagaagaaaacaagaatttctgtaagaagaaccattcacaagcaaatcccaataatact gaaggtcatacagaggctctgtatgaacagaatagcagtattatctcacacagtaaagttagtgatgtccaaggggattc acaaaggagtgatcaccaagggaattcacaggggagtgatcatcaaggggattcacaagtgagtgatcaccaaggggatt cacaaaggagtgatcatcaaggggattcacaaaggagtaatcacctagggaattcacaggggagtgatcatcaaggggat tcactagtgagtgatcaccaaggagattcacaagtgagtgatcacaaaggggattcacaaaacatggattcaggtgacaa agtggaaaacatttctgattctgaagaagtttgcaattctagtaatgagaatataccagaaacaagtaatgagaatatac cagaaacaagtaatgagaatataccagaaacaagtaatgagaatataccagaaacaagtatcttaaacagcttttctgag agtccactgcaagcttccagtaacttatatgatccctatatcgatgtcattactaaaaaagttaagggtacaagttttga atatgccaaagatgtatatgtgtgtaaggaatgtaaattttcatgccagtgcttgttggaaatcaaaaaacacattcaca gtagtcacccaaaccttaaaattcaacaatcagtggaagaacaagatgttactgccagcagtcagtcggtcgtcacaagt cgagaaaagtcaccgcaaattcgtaggaaggtagaatcacaggatattattggtcactatgtgtgtagtaaatgtaagaa agtatttagccgtctgcgatatctcagaaagcatttacaaacccacagaacagaacaaaattatctgtgtgacgagtgcg gaaaacattttaaaaccaaaacgtatctcaccgctcatcgtaagatccataaaaagaaagcttttacgtgtcaacagtgt gattttacatctgaaaatgcttttgagatacacatgcatcgacagatacataataacggctgtattatttgtgacgtgtg cggttatgcgtattctgataagtcaactctggttaaacataaacgcgttcatgacatgtctaggccttttgcgtgtagtt acccaggatgcacttggagatttaagactgaatcaacgtgcattgcccatcttagaggacattctacagtggaggggaaa ttcaaatgttccaagtgtggctatgcctttagacataagcatcacttaaaacgacatgaaagcaaaattcatggattaca tcctgggaagatcgccgcacctaatgatatgagcaacgaggtgattgcaagcagtgactcgatatcaaagaaccaggatg ttgacgttaacgacacagtcagacttctactcaacactgcagatggcgctactgacattggccacgctttacaacccggt aatattgtgataacaactgatacggacggcaaccctgtaaattaccacgttacagatattgaaatcagcagtggatgcga gacggttttggagcaagacaaaaatgtaacagtagctctatgtgtacagacgccgcaggaagaccctgatcaatctcact acgtaccgttaaacattagtctgactgaggagttactaactgatattggtaccacagaaaatataaatacggaaattcat accgagataccagaaacaaggacccaatccgctgatgtcaatcagtga |
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Protein
| Protein ID | pfu_aug1.0_857.1_00521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_857.1_00521.t1 MDNSTNTQSLTSFKIKDAKKQDPSRNLFETAKDAGPSAGIACELCGTGFTRRKTLLDHYRHRHGVIANSGHSKKKDHKKN KLPKKLLDDPPERISTRSVGRKRKQETYAGSEGNGHDVNTCKKKKEIRLEQNARQSEVTVPSSSNGEAKKYASPKENSCT VSNGAVSIGVEGAIGDSEGVTDDVSGGTTGIIGGCDIAVSVDATGIGSGDTISVSHGAISTEENKNFCKKNHSQANPNNT EGHTEALYEQNSSIISHSKVSDVQGDSQRSDHQGNSQGSDHQGDSQVSDHQGDSQRSDHQGDSQRSNHLGNSQGSDHQGD SLVSDHQGDSQVSDHKGDSQNMDSGDKVENISDSEEVCNSSNENIPETSNENIPETSNENIPETSNENIPETSILNSFSE SPLQASSNLYDPYIDVITKKVKGTSFEYAKDVYVCKECKFSCQCLLEIKKHIHSSHPNLKIQQSVEEQDVTASSQSVVTS REKSPQIRRKVESQDIIGHYVCSKCKKVFSRLRYLRKHLQTHRTEQNYLCDECGKHFKTKTYLTAHRKIHKKKAFTCQQC DFTSENAFEIHMHRQIHNNGCIICDVCGYAYSDKSTLVKHKRVHDMSRPFACSYPGCTWRFKTESTCIAHLRGHSTVEGK FKCSKCGYAFRHKHHLKRHESKIHGLHPGKIAAPNDMSNEVIASSDSISKNQDVDVNDTVRLLLNTADGATDIGHALQPG NIVITTDTDGNPVNYHVTDIEISSGCETVLEQDKNVTVALCVQTPQEDPDQSHYVPLNISLTEELLTDIGTTENINTEIH TEIPETRTQSADVNQ |
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