Gene
| Gene Model ID | pfu_aug1.0_85933.1_13359 |
|---|---|
| Locus | scaffold85933.1 : 1 ... 1908 : - |
| To GenomeBrowser | scaffold85933.1:1..1908 |
| Genes list of scaffold | scaffold85933.1 |
| Synonym | pfu_aug2.0_39.1_30035 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_85933.1_13359.t1 | 3 | 1 | Nucleos_tra2_N | 146 | 164 | 8.0e-21 | 74.1 | 0.51 | 1900.0 | -0.8 |
| pfu_aug1.0_85933.1_13359.t1 | 3 | 2 | Nucleos_tra2_N | 176 | 246 | 8.0e-21 | 74.1 | 3.1e-24 | 1.2e-20 | 73.6 |
| pfu_aug1.0_85933.1_13359.t1 | 3 | 3 | Nucleos_tra2_N | 286 | 312 | 8.0e-21 | 74.1 | 0.063 | 230.0 | 2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_85933.1_13359.t1 | gi|327263519|ref|XP_003216567.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_85933.1_13359.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_85933.1_13359.t1 atggaaatggaagtgaaaggaagtacgaatgaaaaaccggaagtggaagtaaatgcggatgaaaaacaagattcagttga agacactcagtattttccacatgtatcaaatctattacacagaatttcattgttgagaattctaattctaattcggctta aattggactcgtgttttaaagcacataagacgtccataaagcgctccgtgtatgttttgttattgctgggatattttgca tatcttacctatgcgatgatttatagatttggtgacgaagggtctcatagactgttaattctaacggtcatcgtcgtcgt cggattcatttttcataaagtgaagaagaaatatggaggagtgatcagaaaacatttacaaaattattactcaaagcatc gtcctagcaacaaatccgtgtttttcattaaaatgattttgatgtgttttgttatactttcgatattgctgtatcttatt ttcggtgtttttatccgggaaccgtacaacatagtccccgctgctggtctcgttgtcttcgttctcaccatgttcttcct gtcacgtgatcctcaaaaggtaagctggcgtccagtgtgctggggactcttactacaattcatctttgccataatcgtgt tgaggaccagttggggatatgacgcttttgattggctaggaaagcgtgtgttggagtatctggcccacacagactatggc gccagttttatgtttggagctggatttgcagagcactattttgcgtttaaggtgctgccagttatattctttttcagcgc cactattgcaatgttgtattaccttggatggatgcaacttctcattgaaaagcttgcttttataatgcagtatagcttgg gcacaacagctctggaatctttacattctgccatcaacatattcatcggatgggcaagtttttttttaaatcatcatcat catcatcatcgtcgtcgtcgtcgtcgtcatcgtcgtccttgtcgtcgtcagcatttgtag |
|
Protein
| Protein ID | pfu_aug1.0_85933.1_13359.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_85933.1_13359.t1 MEMEVKGSTNEKPEVEVNADEKQDSVEDTQYFPHVSNLLHRISLLRILILIRLKLDSCFKAHKTSIKRSVYVLLLLGYFA YLTYAMIYRFGDEGSHRLLILTVIVVVGFIFHKVKKKYGGVIRKHLQNYYSKHRPSNKSVFFIKMILMCFVILSILLYLI FGVFIREPYNIVPAAGLVVFVLTMFFLSRDPQKVSWRPVCWGLLLQFIFAIIVLRTSWGYDAFDWLGKRVLEYLAHTDYG ASFMFGAGFAEHYFAFKVLPVIFFFSATIAMLYYLGWMQLLIEKLAFIMQYSLGTTALESLHSAINIFIGWASFFLNHHH HHHRRRRRRHRRPCRRQHL |
|