Gene
| Gene Model ID | pfu_aug1.0_8608.1_67901 |
|---|---|
| Locus | scaffold8608.1 : 20747 ... 34305 : - |
| To GenomeBrowser | scaffold8608.1:20747..34305 |
| Genes list of scaffold | scaffold8608.1 |
| Synonym | pfu_aug2.0_5456.1_22678 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8608.1_67901.t1 | 2 | 1 | zf-CDGSH | 68 | 100 | 4.8e-29 | 99.8 | 1.4e-19 | 2.1e-15 | 56.2 |
| pfu_aug1.0_8608.1_67901.t1 | 2 | 2 | zf-CDGSH | 116 | 147 | 4.8e-29 | 99.8 | 3.8e-17 | 5.6e-13 | 48.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8608.1_67901.t1 | gi|307180589|gb|EFN68544.1| | Aminopeptidase N [Camponotus floridanus] | 2.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8608.1_67901.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8608.1_67901.t1 atggcgctgcccttgaggattggaatcaaaggaacaaacggcattttcttacgcatattgagttgtagtcgggtttcaaa atgctcaatgtgtgattatgaagatgtgaaagatcttctcaggcagaaaaagagaaaacatccagaaaccccaaaaacta acatagaccccacggaaattataaaaggcaaaatgtgggacaaaaaacctttcaaggtggaattaaaagctgataaacgc tattcctggtgtgcttgtggttacagtaaaaatcagccattctgtgatggaagtcatagggctcttagctatcagttggc agtaggtaataagaagatacatatcaagcctcaccgattcaaagttgaagaaacaaaggagtattggctatgtaactgta aacaaacagataacagaccattctgtgatggatcacataagaaacctgaggtggcagccatcacaagagggccagggccc aatttttag |
|
Protein
| Protein ID | pfu_aug1.0_8608.1_67901.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8608.1_67901.t1 MALPLRIGIKGTNGIFLRILSCSRVSKCSMCDYEDVKDLLRQKKRKHPETPKTNIDPTEIIKGKMWDKKPFKVELKADKR YSWCACGYSKNQPFCDGSHRALSYQLAVGNKKIHIKPHRFKVEETKEYWLCNCKQTDNRPFCDGSHKKPEVAAITRGPGP NF |
|