Gene
| Gene Model ID | pfu_aug1.0_8644.1_60476 |
|---|---|
| Locus | scaffold8644.1 : 15386 ... 24624 : + |
| To GenomeBrowser | scaffold8644.1:15386..24624 |
| Genes list of scaffold | scaffold8644.1 |
| Synonym | pfu_aug2.0_1189.1_31504 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8644.1_60476.t1 | 3 | 1 | PHR | 42 | 130 | 2.1e-20 | 73.4 | 0.016 | 58.0 | 3.8 |
| pfu_aug1.0_8644.1_60476.t1 | 2 | 1 | BACK | 59 | 86 | 8.2e-13 | 48.0 | 0.0058 | 21.0 | 4.9 |
| pfu_aug1.0_8644.1_60476.t1 | 2 | 2 | BACK | 93 | 199 | 8.2e-13 | 48.0 | 2.8e-14 | 1.0e-10 | 41.3 |
| pfu_aug1.0_8644.1_60476.t1 | 3 | 2 | PHR | 149 | 208 | 2.1e-20 | 73.4 | 0.88 | 3300.0 | -1.9 |
| pfu_aug1.0_8644.1_60476.t1 | 3 | 3 | PHR | 249 | 391 | 2.1e-20 | 73.4 | 1.6e-22 | 5.9e-19 | 68.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| pearlSac | 2 |
Transcript
| Transcript ID | pfu_aug1.0_8644.1_60476.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8644.1_60476.t1 atgacgttacgatcacatcgtaatgtaacgctgtctgtagataacttgctgctatattctaatactatttatgccattaa ttgtgtagatatactatcaatatcacgatataatactagtatatgtacatgatatgtgtacacagataatgtatctgtca cggttgacaatgtcctcaaggtcatgtacgcctccaagaagtactgtgtagatctactcacaaaacagtgtaatgatttt gtaaagaaaaatatcaccaatgagaacgcatgcgtgttgatggattctgccttaatgctccaagaagaggacatttacaa gtcatgtttggagaagatcaaggacaacacagaatcatgtatccgaagtccaggttttacaacaataaccaaagagacac tgaaatcaatcacagaacttgatgaagttgctataaaagaggaagtcctttttgagcaggtgatgaaatggtgcgatgct gaatgtaagcgtcaacaattgaaggtcatgtgggaaaataaaagaacagttttaggtgacatactttatgacatcagatt tccgttgatggatccaaagtactttgcagagaaagttggtggggctgaactgctgacagacaaagagaaagttgaaataa tgtactttcattcattgaacaaagctttttctagtaaaattttcaggtatagcgaaagattgaaacggaagatagatatt gaaacgacgttagagagagtaatacgattccctcctaatttcacacagcaatggagcttggacggaccggcagatgccat tgtattttcaacaagtcatgattcagaattccatggtattctaatttacggtactatatcagctccatgtacatattcgg ttgaagtaacgttaagggattacacgggacttcttttcactgacaaaagtagcatacatacaaccaagagattacaaatg tatgaatacaaatttaaggagcctgtgaagataagagctaatgagatgtacaatatggaacttaaaatgcttggaagtca gttttccaaagctggaagaaatgggaacataactgttaccttcggaaatgggcagaagtcggttacattttctgactctg ctttttcaatgaatggaacaaatcaataccaaggacaaatacccggtcttttgttgagttag |
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Protein
| Protein ID | pfu_aug1.0_8644.1_60476.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8644.1_60476.t1 MTLRSHRNVTLSVDNLLLYSNTIYAINCVDILSISRYNTSICTXYVYTDNVSVTVDNVLKVMYASKKYCVDLLTKQCNDF VKKNITNENACVLMDSALMLQEEDIYKSCLEKIKDNTESCIRSPGFTTITKETLKSITELDEVAIKEEVLFEQVMKWCDA ECKRQQLKVMWENKRTVLGDILYDIRFPLMDPKYFAEKVGGAELLTDKEKVEIMYFHSLNKAFSSKIFRYSERLKRKIDI ETTLERVIRFPPNFTQQWSLDGPADAIVFSTSHDSEFHGILIYGTISAPCTYSVEVTLRDYTGLLFTDKSSIHTTKRLQM YEYKFKEPVKIRANEMYNMELKMLGSQFSKAGRNGNITVTFGNGQKSVTFSDSAFSMNGTNQYQGQIPGLLLS |
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