Gene
| Gene Model ID | pfu_aug1.0_8644.1_60477 |
|---|---|
| Locus | scaffold8644.1 : 26366 ... 30891 : + |
| To GenomeBrowser | scaffold8644.1:26366..30891 |
| Genes list of scaffold | scaffold8644.1 |
| Synonym | pfu_aug2.0_1189.1_31502 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8644.1_60477.t1 | 1 | 1 | BACK | 7 | 108 | 2.7e-07 | 30.3 | 1.8e-10 | 1.4e-06 | 28.1 |
| pfu_aug1.0_8644.1_60477.t1 | 1 | 1 | PHR | 153 | 291 | 3.1e-17 | 63.1 | 7.7e-21 | 5.7e-17 | 62.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_8644.1_60477.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8644.1_60477.t1 atgcgtgttgatggatctgctttactccttcaagaagaggacatttacaaattatgcatggataaaataaaagaaaacgc agaagtatgtgtcaaagctgcaagtttttctaccataagcagacagacactaaaggcaatcacagatttagactatgcta atattaaagaagaaattttgtatgagcaggtcatgaaatggtgtgatgctgaatgtgtgcgtcaacaattggaggtcacg tgggaaaataaaagaatattattggacgacatactttatgacatcaggtttccgttgatggatccaagatactttgcaga ggcaatgattgaatccaaactgctttcggatcaagagaaagtagaaatcatgtactatcatgctgttaacaaccctgcgt gtggtaatttgttcaattgtagcaaaagatgcagtcggcaggttgagagagtagtacgatttgcctcccattgtcacggt tcatggaatttgaatggactggaagatgctgttggattccaaacgagtcataactctcttcttcatggtatcatagttta tggaagtgcctcgaagccttgcacatactcagttgtgacaaggatcaaagattcaaatggttctcttctttccatgaccg aaactagtatagactcgaacgaagacatagaattccatgacataaagttcagggaccaagtaaatatcaaagctgacgca gcctatcgtgtggaagtcttgatgacaggatcgtgctcaaaatctggcaagtttgggaaaacggtgattaggtttggaaa tggtataaagaaagtgatattcttcaggtctacaccttcgccgaataaaacgaatgaaatatcgggacaaattcttggtc tactgttggaataa |
|
Protein
| Protein ID | pfu_aug1.0_8644.1_60477.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8644.1_60477.t1 MRVDGSALLLQEEDIYKLCMDKIKENAEVCVKAASFSTISRQTLKAITDLDYANIKEEILYEQVMKWCDAECVRQQLEVT WENKRILLDDILYDIRFPLMDPRYFAEAMIESKLLSDQEKVEIMYYHAVNNPACGNLFNCSKRCSRQVERVVRFASHCHG SWNLNGLEDAVGFQTSHNSLLHGIIVYGSASKPCTYSVVTRIKDSNGSLLSMTETSIDSNEDIEFHDIKFRDQVNIKADA AYRVEVLMTGSCSKSGKFGKTVIRFGNGIKKVIFFRSTPSPNKTNEISGQILGLLLE |
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