Gene
| Gene Model ID | pfu_aug1.0_86828.1_63996 |
|---|---|
| Locus | scaffold86828.1 : 1 ... 2128 : + |
| To GenomeBrowser | scaffold86828.1:1..2128 |
| Genes list of scaffold | scaffold86828.1 |
| Synonym | pfu_aug2.0_5.1_16666 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_86828.1_63996.t1 | 1 | 1 | DTW | 2 | 230 | 2.4e-35 | 121.6 | 2.1e-39 | 3.2e-35 | 121.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_86828.1_63996.t1 | gi|327285893|ref|XP_003227666.1| | PREDICTED: DTW domain-containing protein 1 isoform X1 [Anolis carolinensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_86828.1_63996.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_86828.1_63996.t1 ctcccactcaaaattgacattataaagcatccaaatgaatgtgatgggaagagtacgtcagcccatgctgctgttctggc tccagatcatgtgaatgtttacacatatccatgcatacccgactacccagacccaaataaggttttactcttgttccctg gtccagatgcactaacgttggtggagcttgcagctaaaggtgacatgaagtgcaaagatgacaaatgtagtacagaaaat gttctaggagaaaattccagtacagtagaagacggtactacatatgttatcagcgaaaacggagagacatcttcaccttc tagtgctacaggtaatgataacattcctgcaagtgttaagagaaaaatcgacagcgacaaagacaatttggttgtgaaga aaagacgaacagagcctccatttgataccattgtagtgatagatagtacttggaaccagactaagaggatctcttcagat gaaaggcttaaagatctcacaaaaatcgagctcaaatcacgggagacaaaattttggagacatcagaaagacaatccatc cacatatttatccactgtggaggcagtttattatttagtgcgggactatcatgacctttttgtacttacagattacgccg gtgaatatgacaatcttctgttcttcttcagcttcatgtatcaaaaaattcgaaaattatatgacggaggaaaaaatctc aaagcttttaaagaaagatctga |
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Protein
| Protein ID | pfu_aug1.0_86828.1_63996.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_86828.1_63996.t1 LPLKIDIIKHPNECDGKSTSAHAAVLAPDHVNVYTYPCIPDYPDPNKVLLLFPGPDALTLVELAAKGDMKCKDDKCSTEN VLGENSSTVEDGTTYVISENGETSSPSSATGNDNIPASVKRKIDSDKDNLVVKKRRTEPPFDTIVVIDSTWNQTKRISSD ERLKDLTKIELKSRETKFWRHQKDNPSTYLSTVEAVYYLVRDYHDLFVLTDYAGEYDNLLFFFSFMYQKIRKLYDGGKNL KAFKERS |
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