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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_8683.1_31629
Locus scaffold8683.1 : 27986 ... 33722 : +
To GenomeBrowser scaffold8683.1:27986..33722
Genes list of scaffold scaffold8683.1
Synonym pfu_aug2.0_2725.1_18902

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_8683.1_31629.t1 2 1 NACHT 37 141 3.1e-09 36.7 6.0e-12 1.8e-08 34.2
pfu_aug1.0_8683.1_31629.t1 2 2 NACHT 648 685 3.1e-09 36.7 0.23 680.0 -0.2

Transcript
Transcript IDpfu_aug1.0_8683.1_31629.t1
Definition-
>pfu_aug1.0_8683.1_31629.t1
atgataaaagatgaaagcgataacacagattataaactagatgacaaatcaaatatacagaatacaacactagacaagat
atttcttttgcgagaagaaaaaccagcgcgtttcatttttatgctcggggaagccgggtacggtaaaacagttcaatgtc
aacaaattacaagatcgtggtgtcaagcatggaggaatgaaaattgtcaggatgatttactaggtacactgaaaatattt
gattttctcttttttgtaaaattgcgtgatactcgaaacaatgatgcgtcccttgtagatataatacttgaagcatacag
ccgataccatccatcacaagactgtttaaacaccattcgaaccattctagagcaaggtaagtgtcgcagtcttgttattc
tcgacggccttgatgaatggaatatacctgaagcggataaactttttgataaaggaatacctaactgtagaaatatgtgc
aattccacaattttgataagcatgaggtcatggaagttcattgaagttaaacaaataagactacataagatggacaaagt
tgtccgtttatgtggtctcgataaaagaggattcgagtcctttagagaagcattactttgcaggcatctaaagatggaaa
aaacttctgaggaatttcatgctattaccagtagcattgaatctttcatgtcaacttcatcatatgcggcggcgtccttg
atcaaaattcctttcctagccgttttatgtatccatgcattccattacaacgttcaaagtggtaattcaatgacgactct
ttatctttcaatcattgagacattgatgaagagatcaaatctgtatgatgaaaaaaggactgatagtgtatctgtctacg
ctacattaagagactataggcttgtacagaataatgtaaatgacctatctcacctcggcaaaatagcattttcaggactg
atatcagaaaagaaagctctaattttcaaaagcgaggacttgaatgaaacgtttggtgaagataaattagaaagatatct
taaaactggatttctaatcaaagcaaaaggatctggagaatattgtgcaaaaaacttcgaaatcagttttctacataaaa
caatacaagaattcctcgctgcttttttcctctggacagggggcaacatcgataaaaatttcttaagcaaacacgtgctt
aacattgaagaagcgttggaattttcaatagttttaacatttatctctggactttcatcagtagatggatgcaagatatc
aaggcaactaacttctttggcatcacaagatgaagatattcaaagctttcggttaagttttacaacggatagctatgaaa
aagtttttcatctttatgatttacagctaagatgctacagagaaatcaaagtttcgaacaatatagagtgtttccgtgag
gatcttaaattgaaattttcattttctgacataattttacatggaaaagattcagaccgccagctcatcagagaaactgc
tgacgttttactccagcatccacatgacatagaatcacttcaaatgaaattcatacccgatgacgatcagaatggcataa
caaacgacgaacttaagaacttttttgataaaagtacgtcaataaagtcagtgaatattgatgggtacgttgatggagag
tgcagagtattccgtcattttagcccgaaaatgtcacatctggttaccttaggactacacaacattgcaatcgaaggcga
gatcctgacagatctctttacaaaaaatactacaagaaattttcaggcacttggtctattctacataagatgttctgacg
atccaaatgtcggatttgagtataagtttccatcagaaaaaacaaaacccagtcgacgttctggctatgagcgaaaagaa
agaatacgtgcattacctacgtccgattctcacaataacaaggatagtggaaaaccacttttgaaggaattactgagggt
tcttccggactttgagcttttaacaacattacatgtatcgtacatggagtctttggaggatagaaaaatactcctagctt
tggcaaaggagctacaaattaaaagacaattaaagaactttggatatcagggtagctcagtgtaccacgttggtgatgat
caatatgacactgaaatcattaaagtgatatttacaatgaatcaacttcaatacatttttctncgatgtgtcagctattg
gtgtctttggtaa

Protein
Protein IDpfu_aug1.0_8683.1_31629.t1
Definition-
>pfu_aug1.0_8683.1_31629.t1
MIKDESDNTDYKLDDKSNIQNTTLDKIFLLREEKPARFIFMLGEAGYGKTVQCQQITRSWCQAWRNENCQDDLLGTLKIF
DFLFFVKLRDTRNNDASLVDIILEAYSRYHPSQDCLNTIRTILEQGKCRSLVILDGLDEWNIPEADKLFDKGIPNCRNMC
NSTILISMRSWKFIEVKQIRLHKMDKVVRLCGLDKRGFESFREALLCRHLKMEKTSEEFHAITSSIESFMSTSSYAAASL
IKIPFLAVLCIHAFHYNVQSGNSMTTLYLSIIETLMKRSNLYDEKRTDSVSVYATLRDYRLVQNNVNDLSHLGKIAFSGL
ISEKKALIFKSEDLNETFGEDKLERYLKTGFLIKAKGSGEYCAKNFEISFLHKTIQEFLAAFFLWTGGNIDKNFLSKHVL
NIEEALEFSIVLTFISGLSSVDGCKISRQLTSLASQDEDIQSFRLSFTTDSYEKVFHLYDLQLRCYREIKVSNNIECFRE
DLKLKFSFSDIILHGKDSDRQLIRETADVLLQHPHDIESLQMKFIPDDDQNGITNDELKNFFDKSTSIKSVNIDGYVDGE
CRVFRHFSPKMSHLVTLGLHNIAIEGEILTDLFTKNTTRNFQALGLFYIRCSDDPNVGFEYKFPSEKTKPSRRSGYERKE
RIRALPTSDSHNNKDSGKPLLKELLRVLPDFELLTTLHVSYMESLEDRKILLALAKELQIKRQLKNFGYQGSSVYHVGDD
QYDTEIIKVIFTMNQLQYIFXRCVSYWCLW

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