Gene
| Gene Model ID | pfu_aug1.0_86903.1_06080 |
|---|---|
| Locus | scaffold86903.1 : 1 ... 1722 : + |
| To GenomeBrowser | scaffold86903.1:1..1722 |
| Genes list of scaffold | scaffold86903.1 |
| Synonym | pfu_aug2.0_1957.1_25218 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_86903.1_06080.t1 | 1 | 1 | zf-Di19 | 5 | 58 | 2.4e-06 | 27.5 | 6.8e-09 | 4.6e-06 | 26.6 |
| pfu_aug1.0_86903.1_06080.t1 | 2 | 1 | zf-C2H2 | 6 | 29 | 7.2e-11 | 41.7 | 8.6e-08 | 5.8e-05 | 23.1 |
| pfu_aug1.0_86903.1_06080.t1 | 2 | 1 | zf-C2H2_4 | 6 | 29 | 3.2e-09 | 36.4 | 1.7e-07 | 0.00011 | 22.2 |
| pfu_aug1.0_86903.1_06080.t1 | 2 | 1 | zf-met | 6 | 26 | 1.4e-07 | 31.4 | 1.6e-05 | 0.011 | 15.9 |
| pfu_aug1.0_86903.1_06080.t1 | 2 | 1 | zf-C2H2_jaz | 6 | 27 | 2.9e-07 | 30.4 | 1.9e-07 | 0.00013 | 22.0 |
| pfu_aug1.0_86903.1_06080.t1 | 3 | 1 | zf-H2C2_2 | 6 | 16 | 1.8e-06 | 27.9 | 0.00031 | 0.21 | 11.9 |
| pfu_aug1.0_86903.1_06080.t1 | 3 | 2 | zf-H2C2_2 | 21 | 44 | 1.8e-06 | 27.9 | 1.8e-05 | 0.012 | 15.8 |
| pfu_aug1.0_86903.1_06080.t1 | 2 | 2 | zf-C2H2 | 35 | 57 | 7.2e-11 | 41.7 | 1.1e-07 | 7.3e-05 | 22.8 |
| pfu_aug1.0_86903.1_06080.t1 | 2 | 2 | zf-met | 35 | 54 | 1.4e-07 | 31.4 | 3.6e-05 | 0.024 | 14.8 |
| pfu_aug1.0_86903.1_06080.t1 | 2 | 2 | zf-C2H2_4 | 36 | 54 | 3.2e-09 | 36.4 | 5.8e-06 | 0.0039 | 17.4 |
| pfu_aug1.0_86903.1_06080.t1 | 2 | 2 | zf-C2H2_jaz | 36 | 54 | 2.9e-07 | 30.4 | 0.0035 | 2.4 | 8.4 |
| pfu_aug1.0_86903.1_06080.t1 | 3 | 3 | zf-H2C2_2 | 49 | 58 | 1.8e-06 | 27.9 | 0.22 | 150.0 | 2.9 |
Transcript
| Transcript ID | pfu_aug1.0_86903.1_06080.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_86903.1_06080.t1 aatgcacctgctgaatttgagtgcgaattttgtggcaagtatttcacaaaacgcaaagttttaaatcgtcatatccagac ggtccatgaggggaagtcgaccacatgtgaaatttgcggtctttccttcagccgtaaagacagttatcttcggcatctga aatttaaacatcaacaggatgatggacttgtacgggaagagagtacagacaaaacaaacaaagcaaatgcaaatgacaat gaagagaaatcggaaacagaaaaatgtgattcctcagaaaatgatgatttagaaatggaatgtatttcggaggaggagaa ggacgacatcaacgataatttgggaaactattcaatagaagaaaatggcaagtcattatattaa |
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Protein
| Protein ID | pfu_aug1.0_86903.1_06080.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_86903.1_06080.t1 NAPAEFECEFCGKYFTKRKVLNRHIQTVHEGKSTTCEICGLSFSRKDSYLRHLKFKHQQDDGLVREESTDKTNKANANDN EEKSETEKCDSSENDDLEMECISEEEKDDINDNLGNYSIEENGKSLY |
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