Gene
| Gene Model ID | pfu_aug1.0_87.1_21978 |
|---|---|
| Locus | scaffold87.1 : 75129 ... 78995 : - |
| To GenomeBrowser | scaffold87.1:75129..78995 |
| Genes list of scaffold | scaffold87.1 |
| Synonym | pfu_aug2.0_348.1_27278 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_87.1_21978.t1 | 1 | 1 | Acetyltransf_10 | 29 | 111 | 4.5e-06 | 26.7 | 5.1e-09 | 7.5e-06 | 26.0 |
| pfu_aug1.0_87.1_21978.t1 | 1 | 1 | Acetyltransf_7 | 31 | 111 | 6.8e-07 | 29.3 | 8.2e-10 | 1.2e-06 | 28.5 |
| pfu_aug1.0_87.1_21978.t1 | 1 | 1 | Acetyltransf_1 | 35 | 111 | 6.1e-16 | 58.2 | 5.5e-19 | 8.2e-16 | 57.8 |
| pfu_aug1.0_87.1_21978.t1 | 1 | 1 | FR47 | 56 | 112 | 1.9e-07 | 30.7 | 2.0e-10 | 2.9e-07 | 30.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_87.1_21978.t1 | gi|225717078|gb|ACO14385.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_87.1_21978.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87.1_21978.t1 atgcagcactgtaacttactgtgtttgccggagaattaccaaatgaaatactacttctaccatggtctgtcatggcccca gctgtcatatgtagcagaggatgaaaacggaaagatagttggatatgtactggctaaaatggaagaagatccagaggatt ctgtgccacatggtcatatcacatctctagctgtaaagcggtcccacagacgacttggtcttgctcagaagttgatggac caagcttccaggggcatggtagaatgttttgatgcccagtatgtgtcactacatgtacgaaaaagtaacagggcggctct acatctttataaaaatacactcaaattctcagtgagtgagatagaacctaaatactacgctgatggtgaagatgcttacg ccatgaggagaaatctgtcagagtttagagaacggtttggtctcaaagctttacctgaatctggtccatcgtcttga |
|
Protein
| Protein ID | pfu_aug1.0_87.1_21978.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87.1_21978.t1 MQHCNLLCLPENYQMKYYFYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPEDSVPHGHITSLAVKRSHRRLGLAQKLMD QASRGMVECFDAQYVSLHVRKSNRAALHLYKNTLKFSVSEIEPKYYADGEDAYAMRRNLSEFRERFGLKALPESGPSS |
|