Gene
| Gene Model ID | pfu_aug1.0_87.1_21979 |
|---|---|
| Locus | scaffold87.1 : 86335 ... 90325 : - |
| To GenomeBrowser | scaffold87.1:86335..90325 |
| Genes list of scaffold | scaffold87.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_87.1_21979.t1 | 1 | 1 | Dispanin | 65 | 136 | 2.4e-23 | 81.4 | 1.4e-26 | 4.3e-23 | 80.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_87.1_21979.t1 | gi|291235257|ref|XP_002737561.1| | PREDICTED: proline-rich transmembrane protein 1-like [Saccoglossus kowalevskii] | 4.0e-17 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_87.1_21979.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87.1_21979.t1 atgtcagacgaaaagaaaggaactcctagcagtgcgtccccgcccccaccttacagtcaggcgtataaccagggaggata tggacagaattaccctcctcagggacaatcggcttacccggctggttatagtcaacccgccccgggatactacaatcaaa atcagaccagtgtgttggttgcaccgggagctgttacgatgaatcagccccctcccccggatcatatgaatcttgccata tttgtgacgctatgctgcttctggccaacaggaatcattgccatcctaaaagcgagcgaggcacgtagtgcgatcaaccg gggtgacatcttgacagctcagtccagttcaaggtcagccaaacagatggccaacatatctattatagccggcatctgct ccctagtttttggcctggttattgttggaatatacgtcggggtcctgctttcctactaa |
|
Protein
| Protein ID | pfu_aug1.0_87.1_21979.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87.1_21979.t1 MSDEKKGTPSSASPPPPYSQAYNQGGYGQNYPPQGQSAYPAGYSQPAPGYYNQNQTSVLVAPGAVTMNQPPPPDHMNLAI FVTLCCFWPTGIIAILKASEARSAINRGDILTAQSSSRSAKQMANISIIAGICSLVFGLVIVGIYVGVLLSY |
|