Gene
| Gene Model ID | pfu_aug1.0_87.1_21981 |
|---|---|
| Locus | scaffold87.1 : 93506 ... 95173 : + |
| To GenomeBrowser | scaffold87.1:93506..95173 |
| Genes list of scaffold | scaffold87.1 |
| Synonym | pfu_aug2.0_348.1_27276 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_87.1_21981.t1 | 1 | 1 | Neur_chan_LBD | 21 | 220 | 7.0e-35 | 120.1 | 3.4e-38 | 9.9e-35 | 119.6 |
| pfu_aug1.0_87.1_21981.t1 | 1 | 1 | Neur_chan_memb | 229 | 371 | 6.7e-13 | 49.0 | 2.2e-16 | 6.7e-13 | 49.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_87.1_21981.t1 | gi|345306441|ref|XP_001509745.2| | 3.0e-36 |
Transcript
| Transcript ID | pfu_aug1.0_87.1_21981.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87.1_21981.t1 atgatgctatggttactgatttctctcgtcgctgttggagccaatactatagatgatgtagaaagacttagaaatgttct cttcacatcatacaacagggaggtccgtcctccgtacaacctgtcgacaccacttcaagtttacattacattttcgctta gcgcctttcacgacgtcgatgatgccaatggcgtcatatcatccgtcggtgctttttatctcatgtggttcgacgatcgt ctggtatggaattcaactgaatatggaggtttggaatatattaccgttaggaataatctcatatggatgccaagaatctt ccttcttaatacagcagatttgaaaattctaacaaccaacactgttatgacaaggatttctatgaatggcatgataaacg tcataatgggaggggtcatgcgcacgaactttgaccctcagatgacttacttcccctttgatacccaagtttgctctatg agagtagctattttgggattctaccattacgaggcttacttggtgaatacacgtgaagacatcgaacgcacgactttcat tgaaaacaacggttgggatttgattcgcaccgtagccaaaccttacaatctgggacagtatgggggtatggtggagtatc agttgtttcttcgacgtagacatttgtatattgccattaacacagtggcacccctagttatcctgacactcgtgaacccg atggttttcctattgccaatcgacggcggggagcgtgtgtcattttcagtgacgatgcttctatcattcggtgtattctt gacccagatcagcgatgatctaccggaagtctctgatcccatggcatatatctcatattttctgatgatcaccttggttg gcagcgcaatgataactctgctcgttgtaatcatttctaacctttacttgaccgacccttcaagacctgtccacggcttt atcagagtcctgattttcatcttgtctatgaggtatctccgccatctttgtcgtcattactgcatgaggagaatgaacaa gaaagagaagaagtcggcagaagaggaggaggaagatgacgagaagaagaaagattttgaattcgaggaagaattttgtg acgacagagaagtagtctacacacgacaggacgcagccaaagacattaattttatgtcatttatcttcctgtggctggtc ctttctcttctcctgatagcctccatagtcattgttaagacatcagcttatgacgagtcctcatcatcctactga |
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Protein
| Protein ID | pfu_aug1.0_87.1_21981.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87.1_21981.t1 MMLWLLISLVAVGANTIDDVERLRNVLFTSYNREVRPPYNLSTPLQVYITFSLSAFHDVDDANGVISSVGAFYLMWFDDR LVWNSTEYGGLEYITVRNNLIWMPRIFLLNTADLKILTTNTVMTRISMNGMINVIMGGVMRTNFDPQMTYFPFDTQVCSM RVAILGFYHYEAYLVNTREDIERTTFIENNGWDLIRTVAKPYNLGQYGGMVEYQLFLRRRHLYIAINTVAPLVILTLVNP MVFLLPIDGGERVSFSVTMLLSFGVFLTQISDDLPEVSDPMAYISYFLMITLVGSAMITLLVVIISNLYLTDPSRPVHGF IRVLIFILSMRYLRHLCRHYCMRRMNKKEKKSAEEEEEDDEKKKDFEFEEEFCDDREVVYTRQDAAKDINFMSFIFLWLV LSLLLIASIVIVKTSAYDESSSSY |
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