Gene
| Gene Model ID | pfu_aug1.0_87.1_21983 |
|---|---|
| Locus | scaffold87.1 : 103906 ... 112955 : + |
| To GenomeBrowser | scaffold87.1:103906..112955 |
| Genes list of scaffold | scaffold87.1 |
| Synonym | pfu_aug2.0_348.1_27271 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_87.1_21983.t1 | 2 | 1 | Neur_chan_LBD | 15 | 45 | 2.2e-38 | 131.5 | 0.52 | 1500.0 | -2.0 |
| pfu_aug1.0_87.1_21983.t1 | 2 | 1 | Neur_chan_memb | 16 | 102 | 5.7e-10 | 39.4 | 0.0067 | 20.0 | 4.9 |
| pfu_aug1.0_87.1_21983.t1 | 2 | 2 | Neur_chan_LBD | 144 | 345 | 2.2e-38 | 131.5 | 7.49975e-42 | 2.2e-38 | 131.5 |
| pfu_aug1.0_87.1_21983.t1 | 2 | 2 | Neur_chan_memb | 355 | 443 | 5.7e-10 | 39.4 | 1.9e-13 | 5.7e-10 | 39.4 |
Transcript
| Transcript ID | pfu_aug1.0_87.1_21983.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87.1_21983.t1 atgaacatatcagtcgaaacaaacatcgatgtgcgaaacgaaacaaaaacgaaacgaaacgaaacgaaacaaatcgaaac gaaacgaaacaaatcgaaacgaaacgaaacaaatcgaaacgaaacgaaacagatcgaaacgaaacgaaacaaaacgaaac gaaacagatcgaaacgaaacgaaacagatcgaaacgaaacgatacaaaacataaaacttattgaaaatgagaaaaagagg aaaaatcgcctaaaacgaatataccaagacaagatctcattgaaggcactgatcgacatttatcggcttttaccaaaggc aggtatcatttaccagaaattaaagatggagaataggaggaccatgacaacaagtctttggttaatgtttctatggattc ctgtaatatattcgcatacattcgatgacgaaaaacgtttgcgaaataaactgtttgattcatacaacagtgatattcgg cctccctttgatcatacgacgacattaaacgtttcagttctatatttcattagaagtgtacatgatttggacgatgtctc gagaatttttacagtatctggtgctttccagtcacagtggacagacaaaaggttggtatggaatacaagtgaattttcaa atatacaaactattgtcgtctcatacaaagatatttgggtaccagagctgagagtatataatgcggcagatgaaatgcat ctcgattccgcccattcctctgtccatatcaacagtaacggttcattattctggcttcaagggacgaccattaaggctac ttacgaaccggatatgacgtattttccttatgacactcaaacatgtaaacttcaagtctatagtacaaggtactggaggc acgaagttttcacctttaatgccttgaacacgatggatgcatctttatttgctcaaaataatgaatgggacttagttgaa acgttttccgcggtgtatttttcaaatatctccactacaactcggctcgaattcagtgtcactttagaaaggaagtcttt gtactacactttgtgtatagtggtacctatcgccaccttgaccctcgtgaaccctctggtgttcctactgccatgtgaga gtggtgagagggttactttttctgtcacgatgctcctatccttcggaatttttttcgtacaagttaaggaccatacaccc gagttatcgtaccctatgccgcacttatcctattttgtctttagtacctacataggaagcgcactggcgacggtcttaat catagtgctgaaccattttcatcacaaagacaactcgcatcctgttcctttcttcctatattatgttgtcaggatactat ctttccggattttcctggacttgtgtaagtcatttcgtcgaaaaaagatcaaaatcgaagacattacggactcaagaaat gttaataccaatacacaaagatatcttggacacttgacttggtaccggacgaatctacagccttgtaccagcgcattctt aagaattactctccgagtgactgtggcgacaggactccatgacgggccctgtccaaacctctttaaagaagacatggccc caaccactcgtcctctcttattctcagtcggacccctcgggtga |
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Protein
| Protein ID | pfu_aug1.0_87.1_21983.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87.1_21983.t1 MNISVETNIDVRNETKTKRNETKQIETKRNKSKRNETNRNETKQIETKRNKTKRNRSKRNETDRNETIQNIKLIENEKKR KNRLKRIYQDKISLKALIDIYRLLPKAGIIYQKLKMENRRTMTTSLWLMFLWIPVIYSHTFDDEKRLRNKLFDSYNSDIR PPFDHTTTLNVSVLYFIRSVHDLDDVSRIFTVSGAFQSQWTDKRLVWNTSEFSNIQTIVVSYKDIWVPELRVYNAADEMH LDSAHSSVHINSNGSLFWLQGTTIKATYEPDMTYFPYDTQTCKLQVYSTRYWRHEVFTFNALNTMDASLFAQNNEWDLVE TFSAVYFSNISTTTRLEFSVTLERKSLYYTLCIVVPIATLTLVNPLVFLLPCESGERVTFSVTMLLSFGIFFVQVKDHTP ELSYPMPHLSYFVFSTYIGSALATVLIIVLNHFHHKDNSHPVPFFLYYVVRILSFRIFLDLCKSFRRKKIKIEDITDSRN VNTNTQRYLGHLTWYRTNLQPCTSAFLRITLRVTVATGLHDGPCPNLFKEDMAPTTRPLLFSVGPLG |
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