Gene
| Gene Model ID | pfu_aug1.0_8700.1_53218 |
|---|---|
| Locus | scaffold8700.1 : 1 ... 27055 : - |
| To GenomeBrowser | scaffold8700.1:1..27055 |
| Genes list of scaffold | scaffold8700.1 |
| Synonym | pfu_aug2.0_1088.1_28036 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8700.1_53218.t1 | 1 | 1 | Hist_deacetyl | 129 | 402 | 0.0 | 187.6 | 0.0 | 0.0 | 187.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8700.1_53218.t1 | gi|47087397|ref|NP_998596.1| | histone deacetylase 8 [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 4 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8700.1_53218.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8700.1_53218.t1 atggaagtagccactacctcacagggtcctcatccagtggctgaaccaggtccaggtaccaaggataacggtagtagatg tatatatgatatagacagtcaagatgatgtacatcctcaagcccttatgcccctgagatactctcggaaaccgaagtcgt taaaaggagttgaccagctacacgatggtgagaaagaaaacattgaacatgcttctggaaatcaggatgagacggagaaa aactgggaacaatcttcatgtagtgtcacagctggcaggtctgtaacgatcagtgaagtaaaaatgacgtcggcagcaaa tgctgtcatctatgtatatagtcctgagctactacacatcagtagccaaatggagaaaattcaagggcgggcatttttgg tccatagccttatagcagcttacaacttaaccagctgtttgaaggtggttcccccacgccatgccacagaaaaagagata ctcagcttccattcagaagaatacatgaaattcctgcacaaagtcagccaaacagatgatgatgagaaatttgaggagga ggccaatcagtttggactaacttatgactgtcccgttcatgagggtctgtatgagtatggttcactgacagggggagcaa ctcttactgcggcagaatgtttgcttcgaggagagagtctgacggcaataaactggtgtggaggatggcatcatgcgaaa aaagatcaagcttcagggttttgctatgtgaatgacattgtactgggaatattgaagctgagagagaaatttgataaagt tctgtacgtggatttagatgttcatcatggtgatggagtagaggaggctttttgtgcatcaaccaaagtcctgacattgt ctgtacacaagaaggctgcaggattctatccaggacatcggctgtgtaaagataaaattgaatcaaaacaatcatcacag tacatgttttctttccccaaaacgagcggtatgcctccattttgtgttcgtggtttcaccaacttaagtcacgtgatgct atacagtgaaaaaggagaatgtgatgcagtaattttacagaaagtgaaggaagtctttgtaccagatgctgttgtatgtc agtgtggggcagatggacttgctggggatcctatggactccttcaaccttacacacctagcactggccaaaccactgtac tttatcactaattggaagataccaacacttatcttagggggagaaaatggtgttaattatgtaactgacaaagctgccaa tgggggctattgtgtcacctgtggagcaaagcgacacttatggatcactttgtctattttttacatgaaatacagccctg attttgagctaagtatttctccaggaaacagaaaggatcagaatagaagagaaactctgcagaaaatctatcacaccatc atggccaatcttgggaagatagcctga |
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Protein
| Protein ID | pfu_aug1.0_8700.1_53218.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8700.1_53218.t1 MEVATTSQGPHPVAEPGPGTKDNGSRCIYDIDSQDDVHPQALMPLRYSRKPKSLKGVDQLHDGEKENIEHASGNQDETEK NWEQSSCSVTAGRSVTISEVKMTSAANAVIYVYSPELLHISSQMEKIQGRAFLVHSLIAAYNLTSCLKVVPPRHATEKEI LSFHSEEYMKFLHKVSQTDDDEKFEEEANQFGLTYDCPVHEGLYEYGSLTGGATLTAAECLLRGESLTAINWCGGWHHAK KDQASGFCYVNDIVLGILKLREKFDKVLYVDLDVHHGDGVEEAFCASTKVLTLSVHKKAAGFYPGHRLCKDKIESKQSSQ YMFSFPKTSGMPPFCVRGFTNLSHVMLYSEKGECDAVILQKVKEVFVPDAVVCQCGADGLAGDPMDSFNLTHLALAKPLY FITNWKIPTLILGGENGVNYVTDKAANGGYCVTCGAKRHLWITLSIFYMKYSPDFELSISPGNRKDQNRRETLQKIYHTI MANLGKIA |
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