Gene
| Gene Model ID | pfu_aug1.0_87014.1_64003 |
|---|---|
| Locus | scaffold87014.1 : 1 ... 2108 : - |
| To GenomeBrowser | scaffold87014.1:1..2108 |
| Genes list of scaffold | scaffold87014.1 |
| Synonym | pfu_aug2.0_427.1_24017 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_87014.1_64003.t1 | 2 | 1 | Cu-oxidase_3 | 67 | 171 | 1.5e-38 | 131.1 | 2.29995e-41 | 1.1e-37 | 128.3 |
| pfu_aug1.0_87014.1_64003.t1 | 2 | 1 | Cu-oxidase_2 | 85 | 169 | 1.2e-31 | 109.0 | 0.00015 | 0.72 | 9.3 |
| pfu_aug1.0_87014.1_64003.t1 | 2 | 1 | Cu-oxidase | 178 | 346 | 4.0e-31 | 108.0 | 2.5e-33 | 1.2e-29 | 103.2 |
| pfu_aug1.0_87014.1_64003.t1 | 2 | 2 | Cu-oxidase_3 | 288 | 322 | 1.5e-38 | 131.1 | 0.19 | 940.0 | -0.5 |
| pfu_aug1.0_87014.1_64003.t1 | 2 | 2 | Cu-oxidase_2 | 450 | 589 | 1.2e-31 | 109.0 | 2.1e-31 | 1.0e-27 | 96.3 |
| pfu_aug1.0_87014.1_64003.t1 | 2 | 2 | Cu-oxidase | 462 | 502 | 4.0e-31 | 108.0 | 0.061 | 300.0 | 1.2 |
Transcript
| Transcript ID | pfu_aug1.0_87014.1_64003.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87014.1_64003.t1 gaggcattcacatgcgacaagacagcaaccacgtgtgagacaaagcttataatcagccagtacgtcactatgcttcaccc aactgagagtgcggtgtttccatcagacggtaaactctacagatatgacgtcacaaatacgtcagcagccacaccgataa atgtatctgaagtaatcgttggtgacggattccaacatcaaaaactggtggttgtctttaatatgtccatgccgggacct gatatcattgtatacgagggtcaaagactcgttgtgaccgtagtaaatcagctccattctgaagcagtcacggtccactg gcacggacttccacagcgtgggtcgccatacatggatggtgttccctttgtcacacaatgtcctgtcaatccaggtgcct ccttcagatacgactttatagcaagaccaaagggatcatattggtatcattcacacgtgggcgggcaaaggaccgagggg gcctttggagcacttatcattcgtgacaatcaaccatcatattccctagaggagcacatcatacaagttcaagaatggag tcataaatacagctctaatttagcattgcaacaatttaagactgatgtcatcaatggagttaaagcgtcaccccagagat actttgacggatcggaagcagatcttattgatgttgattctgccttaatcaatggaaaaggccgatacaaatcgaatcag tcaaatgattacaactccactccactcgaggtgtataatgtcaaaatgggaagaaaatatcgcttcagagttataggagt gggttcgatgtttccatttcgagtctctgttgacaaccataaactaacaatagtagctacagacggtcatgacgtcatac ctatggagtatgattcatttatcatatatcccggagaaagatatgattttctattgaatgcctctcacactgcgtcaaat tattggattcgtggtgagtctatacgagctcacgaggagcacatagtagcttgggcaatacttcgatatgatggtgctcc agacgaggaaccaacatcgcactcacaaagagtaccttgtacaagttcatccaaatgttatattctgaactgcccaactt tgaattatccactgggtgaaaatagtatttgtcatgacgtcacgaaattaaggttacttgatggtcacgatagcgttcca gattttgtccaaggtcaatcgacggaatatcactttgcgttaagtcgatttagaggattattctacattataaatgccag acatttcgtgcatccagtagtttctgccatctcccagcccaacgctataactgctaaatgtgatgactgtatcggtaacg gactttgccattgtacgcattctgtcactctaaaccatgacaatacagttcaaatgaccctgttctatggtcatttaggg agttcacttggtcatcctatgcatttacatggtcattctttttacgtggtgaagatggggtacgcaatgtataatgagac gactgcacaatacatttcagcctcggaagacaccgagtgcataggttttggatgtatgcgtctaaagttttcgaattcat catggcagggtgatgatatccccggaattcagctcaataatccaccacgaaaagataccatcctggtgcccagagggggt tatgttgtcatccgtatcaaggccgataacccaggtttgtggatgatgcattgccatgccgttttacactctcttgacaa ctttgcttttttgtttaacgaatcgttcaatcatttgccgagaaaacccgaaggcttcccagaatgtaataacttcccgc caatacaagaatccacggttcccacaaattatgacagaactactgtttcctctacaaagagtgatgaaagaagtacatct atggcaaagtcgcagaactgtaagtgtaatatacaaaattttctttga |
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Protein
| Protein ID | pfu_aug1.0_87014.1_64003.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_87014.1_64003.t1 EAFTCDKTATTCETKLIISQYVTMLHPTESAVFPSDGKLYRYDVTNTSAATPINVSEVIVGDGFQHQKLVVVFNMSMPGP DIIVYEGQRLVVTVVNQLHSEAVTVHWHGLPQRGSPYMDGVPFVTQCPVNPGASFRYDFIARPKGSYWYHSHVGGQRTEG AFGALIIRDNQPSYSLEEHIIQVQEWSHKYSSNLALQQFKTDVINGVKASPQRYFDGSEADLIDVDSALINGKGRYKSNQ SNDYNSTPLEVYNVKMGRKYRFRVIGVGSMFPFRVSVDNHKLTIVATDGHDVIPMEYDSFIIYPGERYDFLLNASHTASN YWIRGESIRAHEEHIVAWAILRYDGAPDEEPTSHSQRVPCTSSSKCYILNCPTLNYPLGENSICHDVTKLRLLDGHDSVP DFVQGQSTEYHFALSRFRGLFYIINARHFVHPVVSAISQPNAITAKCDDCIGNGLCHCTHSVTLNHDNTVQMTLFYGHLG SSLGHPMHLHGHSFYVVKMGYAMYNETTAQYISASEDTECIGFGCMRLKFSNSSWQGDDIPGIQLNNPPRKDTILVPRGG YVVIRIKADNPGLWMMHCHAVLHSLDNFAFLFNESFNHLPRKPEGFPECNNFPPIQESTVPTNYDRTTVSSTKSDERSTS MAKSQNCKCNIQNFL |
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