Gene
Gene Model ID | pfu_aug1.0_8724.1_67918 |
---|---|
Locus | scaffold8724.1 : 1 ... 9054 : + |
To GenomeBrowser | scaffold8724.1:1..9054 |
Genes list of scaffold | scaffold8724.1 |
Synonym | NA |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | latrophilin-3-like |
Description | NCBI blastp hit to ref|XP_420575.3| [Gallus gallus] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_8724.1_67918.t1 | 1 | 1 | 7tm_2 | 57 | 190 | 2.1e-34 | 118.7 | 9.9e-38 | 2.5e-34 | 118.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_8724.1_67918.t1 | gi|326918764|ref|XP_003205658.1| | 2.0e-37 |
Transcript
Transcript ID | pfu_aug1.0_8724.1_67918.t1 |
---|---|
Definition | - |
>pfu_aug1.0_8724.1_67918.t1 gtaattcccttagttgtcgaccaccttggataaaactacgtagagcatgctacaaatttgtcaaatctccacagaaatgg attgatgctaagatgcactgcaactctgagggcggcgatttggtttcgatagttaccttctcagaaaagatgatgtacac tcattcagtactactacagtacattacttttgttggctgtatcatttctattgtcagtctcttcacaagctggctcacat tccaatgcttagggtcgttgcagaatgagaggaattctattcacaaaaacttggtcttttgtctctttgctgcagaaatt atatttcttgttggaataagcagaacagaacaacaggtggcttgtgcagctatagctctgctacttcatttcttcttcct gtcggcatttacctggatgttgatggagggcatccacatcaccgtaatgttggtacaagtgtttgacgctgctcgctcac gactcaaatattactacctttttgcctatggtgtacctgttgccatagtagctgccactgccaccattgattttacagct tatggcacaagagaattgtaa |
Protein
Protein ID | pfu_aug1.0_8724.1_67918.t1 |
---|---|
Definition | - |
>pfu_aug1.0_8724.1_67918.t1 NSLSCRPPWIKLRRACYKFVKSPQKWIDAKMHCNSEGGDLVSIVTFSEKMMYTHSVLLQYITFVGCIISIVSLFTSWLTF QCLGSLQNERNSIHKNLVFCLFAAEIIFLVGISRTEQQVACAAIALLLHFFFLSAFTWMLMEGIHITVMLVQVFDAARSR LKYYYLFAYGVPVAIVAATATIDFTAYGTREL |