Gene
| Gene Model ID | pfu_aug1.0_8742.1_60488 |
|---|---|
| Locus | scaffold8742.1 : 1 ... 21772 : + |
| To GenomeBrowser | scaffold8742.1:1..21772 |
| Genes list of scaffold | scaffold8742.1 |
| Synonym | pfu_aug2.0_12743.1_13139 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8742.1_60488.t1 | 1 | 1 | DUF3534 | 1 | 82 | 4.8e-06 | 26.5 | 1.3e-09 | 9.4e-06 | 25.5 |
| pfu_aug1.0_8742.1_60488.t1 | 3 | 1 | PDZ | 202 | 228 | 3.9e-12 | 46.1 | 0.59 | 4400.0 | -2.1 |
| pfu_aug1.0_8742.1_60488.t1 | 3 | 2 | PDZ | 374 | 424 | 3.9e-12 | 46.1 | 1.9e-10 | 1.4e-06 | 28.3 |
| pfu_aug1.0_8742.1_60488.t1 | 3 | 3 | PDZ | 453 | 492 | 3.9e-12 | 46.1 | 4.4e-06 | 0.032 | 14.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8742.1_60488.t1 | gi|291233447|ref|XP_002736664.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_8742.1_60488.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8742.1_60488.t1 ttaatagcggactatgaggaacaaggtagtcagacctaccaaccccataacggagatggcgcgagtcagagttctgccgg cactaccagccctgacatattccaggggtcagaggtcacggcacatctccatgacaacaagaatttctcagcttacagac aagatgatgaacatgatgtcatagtcacgtccagggatttagaaggtgtaggtccagggttaactgtgaggaggggcagt gaacctgtgctaaatattctacctggggatgatgacagtaagataagtctgaaggaaaatcatcagcttcatgatcagtc agactctgaggaccatgaggttgccaaggagatggacggaggtggggaccgtaccaaaggtagctttagtcgattctcca gagattcttggagacagtccctgggtaacagaccagacatgtacaaatggctggaggctcaggaacgacagcatgataaa atacaacagatggagcgtacagagccagtgggaggagcaagtattgagcatacctctacaaaaccccaacatcccctcga accaagacccacgcaagggagtatactaatcaacctaccaaacgatggaggaccactcggcatccatgttgtaccggatt atagtgaaaatggcagagcacaggacattttccggtcagccatgaagagggatgagatcaaactacggatcataaagaag caggtgccccctctgcccaagcagcctccccctccagtaatgcccaagcccagagggcacataccactcaagccatcacc cctgaccttacctttacatggactagtccattctgactcgctctcccctactggacctgatggaacgagcacaccagctc aaaatagcagcagcagcagtttagagggaacagttgtcaagtcacctatcctccctaacaaactggctccacccgcagtc cctccctctcccactaaacgtgtccctcctgctgtccccatgcggcaccccaccacctcactaaccactgacaaagggga gaactctggtaccacaaccggacagcagaaacttgtggctccaaccaacacgaagaaaattggaaagaaaatagacatag tgctgacaaaaggtcctgtaggacttggatttagtgttacaaccagagacaatccggcaggaggggattccccaatctat attaagaatatcctacctagaggagctgccatcacagatggtagactgagggccggagacagacttttggagcctgccga gaaatcaggagatgatggcacgctggccaacatgaaaaacaaggacattatctcgctggacattcctctgaacgactcgg ggtcggccggactaggggtcagtgtgaagggtaaaaccttgactactgaccaggtgaccaaggatctgggtatttttgtc aagtctgtgatacatggaggtgctgcctccaaggacatatacagcttcttcaaagatataggaatgccaaattcaacaat tttcacctga |
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Protein
| Protein ID | pfu_aug1.0_8742.1_60488.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8742.1_60488.t1 LIADYEEQGSQTYQPHNGDGASQSSAGTTSPDIFQGSEVTAHLHDNKNFSAYRQDDEHDVIVTSRDLEGVGPGLTVRRGS EPVLNILPGDDDSKISLKENHQLHDQSDSEDHEVAKEMDGGGDRTKGSFSRFSRDSWRQSLGNRPDMYKWLEAQERQHDK IQQMERTEPVGGASIEHTSTKPQHPLEPRPTQGSILINLPNDGGPLGIHVVPDYSENGRAQDIFRSAMKRDEIKLRIIKK QVPPLPKQPPPPVMPKPRGHIPLKPSPLTLPLHGLVHSDSLSPTGPDGTSTPAQNSSSSSLEGTVVKSPILPNKLAPPAV PPSPTKRVPPAVPMRHPTTSLTTDKGENSGTTTGQQKLVAPTNTKKIGKKIDIVLTKGPVGLGFSVTTRDNPAGGDSPIY IKNILPRGAAITDGRLRAGDRLLEPAEKSGDDGTLANMKNKDIISLDIPLNDSGSAGLGVSVKGKTLTTDQVTKDLGIFV KSVIHGGAASKDIYSFFKDIGMPNSTIFT |
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